Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0039 ATGATTACGTTGCCATATTCTTCATCTCCTTTCTCTACTTGCTTCTTACACACCAAATTCAGCACTAATCGCTTCCTCTCTCGAATTCAAAGCAATGATTCTCCAACAAAACCATCCAATTTTATCCCATTCCTAACCAAGCAAACCCCAGACGACAACAACAACAACAACAACTTTTTGAAGCGAAGAGAGGCAATAGGGCTTACCTTTGGATTCGGCCTTTGCGATATTATGCTTCATTCACTGCCAAAAGCCGCGTCAGCAGCCGAATCAGGAGCAGCTCCATGCGAACTAACAGTGGCCTCTTCAGGTATCGCCTTCTGTGATAAAGTTATGGGAAAGGGTCCGCGAGCTGAAAAGGGACAGCTCATTAAGGCACATTATGTTGGGAAATTGGAGAATGGGAAAATTTTCGACAGCAGCTATAATCGTGGCAAGCCTCTGACATTTCGTGTTGGCGTTGGGGAGGTGATCAAAGGATGGGATGAAGGCATATTAGGAGGAGAAGGAATACCACCCATGCTTGCAGGAGGCAAACGAACATTGAAAATTCCTCCAGAACTTGCATATGGCTCAAGAGGAGCTGGTTGTAGAGGAGGTTCATGCATCATCCCTCCTGATTCGGTGCTATTATTTGATGTGGAGTTCATTAGCAAGGCTTGA 663 0.4525 MITLPYSSSPFSTCFLHTKFSTNRFLSRIQSNDSPTKPSNFIPFLTKQTPDDNNNNNNFLKRREAIGLTFGFGLCDIMLHSLPKAASAAESGAAPCELTVASSGIAFCDKVMGKGPRAEKGQLIKAHYVGKLENGKIFDSSYNRGKPLTFRVGVGEVIKGWDEGILGGEGIPPMLAGGKRTLKIPPELAYGSRGAGCRGGSCIIPPDSVLLFDVEFISKA 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0039 220 FunFam Peptidylprolyl isomerase 93 219 - -
Lele14g0039 220 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 115 217 IPR001179 GO:0003755
Lele14g0039 220 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF LUMENAL LOCATION 4, CHLOROPLASTIC 33 218 IPR044183 GO:0009507
Lele14g0039 220 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 121 220 IPR001179 GO:0003755
Lele14g0039 220 Gene3D - 93 220 IPR046357 GO:0003755
Lele14g0039 220 SUPERFAMILY FKBP-like 98 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0039 Lele-ChrLele14 601170 603374 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0039 119 218 Calmodulin-binding Proteins AT5G48570 45.000 8.19e-18 79.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0039 14 601170 603374 Lele14g0039 14 601170 603374 ECH
Lele14g0039 14 601170 603374 Lele15g2400 15 28269966 28272411 hybridization
Lele14g0039 14 601170 603374 Lele16g2358 16 23988248 23991041 hybridization