Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0025 ATGAAGAAGCAGAGGTCATCTGCTAATGATGATCATAGTGCTGGTGAATTGGCATTCATTTCCTCTTATTCAGAAGACAGCAGGGAATCTGTGGACAAGTGGATGGCATTTCCTAGCGAATCAAATTTTGCCAATTCTGGTAGCTCAGCAAATATGGATGATTTTGGGGCCAACAATGGAAAGAAAGATAATGATGCAAAGGGGCGTCTGAATGAGCAGACGCCTTTTGATAAACAAATTTTAACTGAAGCAAGCATAGCTGAGAGAACTGCTGAATGGGGCCTTGTGATGAACTCAGGTAGTTTTAAAGCAATAGGAGGAGTGGCAACCAGTTCCTCCTTCGATGGTGAAAGAAGCAAAAATTTGTCAGATAGATTTACTGCAGCAGTATCAACAAGGACATCTGAGGAATCAAATTATGGGTCAGAGTCATCAGCAGGGGCATTCCCAAGGGTATCACAGGAGTTGAAGGAAGCCTTGGCAACACTACAACAGACGTTTGTTGTCTCAGATGCAACTAAACCAGACATCCCAATAATGTATGCCAGCAGTGGATTTTTCAGTATGACAGGTTATTTTTCAAAGGAGGTCATTGGGAGGAATTGCCGGTTTCTTCAGGGCCCTGAAACAGACCAGAAAGAAGTGGCCAAAATTCGAGATGCAGTTAAAAATGGGAGAAGCTATTGTGGCAGGCTTTTAAACTACAAGAAAGATGGAACCCCGTTCTGGAATCTTCTCACTGTCACTCCTATAAGAGATAGCCAGGGCAATGTCATCAAATTCATTGGAATGCAGGTTGAGGTGAGTAAATTCACTGAAGGTGTGAATGAAAAGGCATTACGGCCAAATGGATTGTCCAAATCATTAATTCGTTATGATGCCCGTCAAAAGGAGAAAGCTTTGGGTTCCATCACAGAGGTTGTCCAAACTGTCAGGGACCCAAAATCCATCATTCGGCCTGTAAGCCATGACAATTCCAGTAAGCTTGAAGAGCAAGAAAAAATCAATTCTGATTTTGTTTTGCCAAAGTCTGTTGAAATTGAGAGTACTAGTTCAACAAAGAGGCAAACTGCTTCACTAGACTTCCAAGGTGATAAAGGCAAAAGGAAGTCAGGGCGCATTTCTTTCATAAGTTTTAAAGGGAGATCTCTAAGCTCTATGGAAAAGCATGATGAAAATCCCGTTGTTGAGCCAGAGGTTTTGATGACTAAGGACATGGAACGTTCTGAAACTTGGGAGCGTTCTCAAAGAGAGAGGGATATACGACAGGGAATTGATCTAGCAACCACATTGGAGCGCATTGAAAAGAATTTTGTGATTTCTGATCCTAGACTTCCAGACAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTTACAGAATATACGCGTGAAGAAATTTTGGGAAGAAACTGTCGGTTTCTTCAAGGACCAGAAACAGATCAAGCAACTGTCCAAAAGATTAGAGATGCAATAAGAGAGCAGAGGGAAATCACAGTTCAGCTGATCAACTATACCAAGAGTGGAAAGAAGTTCTGGAATTTGTTCCACTTGCAGCCTATGCGTGATCATAAGGGTGAGCTTCAATACTTTATAGGCGTCCAATTAGATGGAAGTGATCATGTAGAACCTTTAAGAAACCGCCTATCTGAGAGAACAGAGCAACAAAGTGCAAAGTTGGTCAAAACAACTGCAGAAAATGTTGATGAGGCTGTACGAGAGCTTCCTGATGCCAACTTGAGACCCGAAGATTTGTGGGCAATTCATTCTCAGCCTGTCTTCCCAAGACCTCATAAAAAGGAAAGTTCTTCTTGGTTAGCAATACAGAAGTTAACTGCAAGTGGTGAAAAAATTGGACTTCATCATTTTAAGCCAATAAGGCCATTGGGTTGTGGAGATACTGGCAGTGTTCACCTTGTGGAGCTTCAAGGTGCAGGTGAACTATATGCAATGAAGGCAATGGAAAAATCAGTCTTGCTAAATCGTAATAAGGTTCATCGAGCATGCATTGAGAGAGAAATTATATCATTGCTTGATCATCCTTTTCTTCCCACTCTATACACTTCTTTTCAGACTCCTACACATGTATGTTTGATAACAGACTTCTTCCCTGGAGGCGAATTGTTTGCATTGTTGGATAAGCAACCCATGAAGATTTTCAAGGAGGAATCAGCAAGATTCTATGCTGCGGAGGTTGTTATAGGTTTGGAATACCTCCACTGCTTAGGTATAATTTATCGAGACCTAAAGCCTGAAAATATTTTACTTCAGAAGGATGGTCACATTGTATTAACTGATTTTGATTTATCATTCATGACTGCTTGTAAACCCCAGATTGTGAAGCATCCTCCACCAAGGAGAAGATCGCGAAGTCAACCACCACCAACATTTGTTGCGGAGCCTGATGCACAATCAAACTCCTTTGTTGGAACAGAAGAATACATAGCTCCTGAAATTATAACTGGAGCTGGGCATAGCAGTGCTATAGATTGGTGGGCTCTTGGTATATTGTTGTATGAAATGCTGTATGGTCGTACACCATTCAGAGGAAAGAACAGGCAGAAGACATTTGCCAACATCTTGCACAAAGATCTAACCTTTCCAAGCAGTATCCCGGTAAGTCTTGCAGGCAGGCAGTTGATTAATGCACTATTGCAAAGAGACCCAGCCGGCCGTTTAGGTTCAAGTACTGGAGCTAATGAAATCAAACAACATCCGTTTTTCCGTGGAATCACTTGGCCTTTAATCCGTTGCATGAATCCACCCCCTCTAGAAGCTCCTCTTAAATTGATAGGGAAAGACCCAATACAAAAGGAAGTGAAATGGGAAGATGATGGAGTGCTTGTTCGCTCAATGGATTTGGATATCTTCTGA 2877 0.4171 MKKQRSSANDDHSAGELAFISSYSEDSRESVDKWMAFPSESNFANSGSSANMDDFGANNGKKDNDAKGRLNEQTPFDKQILTEASIAERTAEWGLVMNSGSFKAIGGVATSSSFDGERSKNLSDRFTAAVSTRTSEESNYGSESSAGAFPRVSQELKEALATLQQTFVVSDATKPDIPIMYASSGFFSMTGYFSKEVIGRNCRFLQGPETDQKEVAKIRDAVKNGRSYCGRLLNYKKDGTPFWNLLTVTPIRDSQGNVIKFIGMQVEVSKFTEGVNEKALRPNGLSKSLIRYDARQKEKALGSITEVVQTVRDPKSIIRPVSHDNSSKLEEQEKINSDFVLPKSVEIESTSSTKRQTASLDFQGDKGKRKSGRISFISFKGRSLSSMEKHDENPVVEPEVLMTKDMERSETWERSQRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVQKIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDHKGELQYFIGVQLDGSDHVEPLRNRLSERTEQQSAKLVKTTAENVDEAVRELPDANLRPEDLWAIHSQPVFPRPHKKESSSWLAIQKLTASGEKIGLHHFKPIRPLGCGDTGSVHLVELQGAGELYAMKAMEKSVLLNRNKVHRACIEREIISLLDHPFLPTLYTSFQTPTHVCLITDFFPGGELFALLDKQPMKIFKEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHIVLTDFDLSFMTACKPQIVKHPPPRRRSRSQPPPTFVAEPDAQSNSFVGTEEYIAPEIITGAGHSSAIDWWALGILLYEMLYGRTPFRGKNRQKTFANILHKDLTFPSSIPVSLAGRQLINALLQRDPAGRLGSSTGANEIKQHPFFRGITWPLIRCMNPPPLEAPLKLIGKDPIQKEVKWEDDGVLVRSMDLDIF 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0025 958 ProSiteProfiles PAS repeat profile. 152 225 IPR000014 -
Lele14g0025 958 MobiDBLite consensus disorder prediction 350 369 - -
Lele14g0025 958 ProSiteProfiles PAS repeat profile. 423 496 IPR000014 -
Lele14g0025 958 Pfam Protein kinase domain 626 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0025 958 Gene3D Transferase(Phosphotransferase) domain 1 708 919 - -
Lele14g0025 958 FunFam LOV domain-containing protein 623 707 - -
Lele14g0025 958 Pfam PAS domain 446 538 IPR000014 -
Lele14g0025 958 Pfam PAS domain 174 269 IPR000014 -
Lele14g0025 958 TIGRFAM sensory_box: PAS domain S-box protein 449 541 IPR000014 -
Lele14g0025 958 TIGRFAM sensory_box: PAS domain S-box protein 179 269 IPR000014 -
Lele14g0025 958 Gene3D PAS domain 412 576 - -
Lele14g0025 958 CDD STKc_phototropin_like 622 932 - -
Lele14g0025 958 ProSitePatterns Protein kinases ATP-binding region signature. 630 653 IPR017441 GO:0005524
Lele14g0025 958 CDD PAS 446 538 IPR000014 -
Lele14g0025 958 FunFam LOV domain-containing protein 412 576 - -
Lele14g0025 958 ProSiteProfiles Protein kinase domain profile. 624 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0025 958 MobiDBLite consensus disorder prediction 42 72 - -
Lele14g0025 958 SMART pac_2 229 271 IPR001610 -
Lele14g0025 958 SMART pac_2 500 542 IPR001610 -
Lele14g0025 958 ProSitePatterns Serine/Threonine protein kinases active-site signature. 745 757 IPR008271 GO:0004672|GO:0006468
Lele14g0025 958 MobiDBLite consensus disorder prediction 780 803 - -
Lele14g0025 958 SUPERFAMILY Protein kinase-like (PK-like) 601 931 IPR011009 -
Lele14g0025 958 Gene3D PAS domain 166 335 - -
Lele14g0025 958 CDD PAS 179 268 IPR000014 -
Lele14g0025 958 Gene3D Phosphorylase Kinase; domain 1 623 707 - -
Lele14g0025 958 SMART serkin_6 624 909 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele14g0025 958 ProSiteProfiles PAC domain profile. 497 551 IPR000700 -
Lele14g0025 958 PANTHER FLIPPASE KINASE 1-RELATED 132 926 - -
Lele14g0025 958 FunFam Putative LOV domain-containing protein 166 322 - -
Lele14g0025 958 MobiDBLite consensus disorder prediction 58 72 - -
Lele14g0025 958 SUPERFAMILY PYP-like sensor domain (PAS domain) 442 538 IPR035965 -
Lele14g0025 958 SMART pas_2 425 494 IPR000014 -
Lele14g0025 958 SMART pas_2 154 223 IPR000014 -
Lele14g0025 958 FunFam Putative LOV domain-containing protein 708 921 - -
Lele14g0025 958 ProSiteProfiles PAC domain profile. 226 280 IPR000700 -
Lele14g0025 958 SUPERFAMILY PYP-like sensor domain (PAS domain) 173 265 IPR035965 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0025 Lele-ChrLele14 491036 505951 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0025 84 957 AGC Kinase Gene Family AT5G58140 75.311 0.0 1330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lele14g0025 Pkinase 2.7e-59 CL0016