Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0023 ATGTATCCCATACTCATACACTCGCATGAAGGGATGGTTGCTCAGGAAGACATGCTGGGTGGGTCCAATCACAGTCACAACAACAACGGAGATCCATGTCTGGTGTTGACGGCCGATCCCAAACCTCGTCTTCGTTGGACCCAGGACCTCCATGAACGATTCGTCGATGCTGTTATTCAGCTTGGGGGTGCTAGCAAAGCTACACCGAAAGCAATCATGCGGACCATGAATGTAAAGGGTTTGACTTTATTTCATTTGAAGAGTCATCTTCAGAAATACAGACTTGGCAAGCAATCAGGCAAAGATATGGTTGAGGGATGCAAAGATGGAATATCAGGTTCATATCTTTTAGAAAGCCCTGGTACTGATAACTCTTCCCCAAAGCTGCTGGCCTCTGATACGAATGAGGGTCATGAAATCAAGGAGGCTTTAAGAGTACAGATGGAAGTACAAAGTGAACTGCATATGCAAGTGGAGGCAGAGAAGCAATTGCAGATTCGCCAGGATGCGGAGCGAAGATATATGGCCATGCTTGAAAGAGCTTGCAAGATGCTGGCTGATCAGTTTATTGGTGCTGCAGTCATAGACACAGACAACCGAAATTTTCAAGGGCATGGAAGTGAAGCACCAAGAGGTCCTTTTGTTGACCATCGTGGCTTTTACTCCTTACCATCTACCAGTACGACCGGAGCTCTCGGAGAAGAATTATCTAATCTCCATTCCCAAAGGGCTGACTGTTCGACCGAAAGTTGCCTGACATCGCAGCATGAAAGCCCCGGAGGTTTGACATTGGAAGGATCTCCCATTAGTGTGCCAAACAAGAGGATGCTGAGCTTGGAATCCATGGCGGCAGCCCCTTTGATGTGGAGTGAAGCCACCACGAGAAGTCAAGGCATTAACGTGGCCCAAGAGGGTTCTGAGCTATTTGGATTTCAATTCCTTCAAGAATGGAATGCTTCCAAGATACCAAATGGGGTATTTGCTGCATTTACTGCTCAACGCGTACCAGGCCACAAGAAAAAGACACAAGAAAAGGAAAATGATAACTTTTTCTCATCAAACTCATGCATAACCGATCACACCGCGAAGCCACGAAAGGAGCCTTTTGTTGCAGCACTAACCCGTGAAACCCGGAGGCACTGTGCTTCGCCTAGATCTGCGCCTCTGTTCTTCATTTTTGCTCGATTTCGCTTCTGGATTACTTGGTTCCGCTAG 1215 0.4716 MYPILIHSHEGMVAQEDMLGGSNHSHNNNGDPCLVLTADPKPRLRWTQDLHERFVDAVIQLGGASKATPKAIMRTMNVKGLTLFHLKSHLQKYRLGKQSGKDMVEGCKDGISGSYLLESPGTDNSSPKLLASDTNEGHEIKEALRVQMEVQSELHMQVEAEKQLQIRQDAERRYMAMLERACKMLADQFIGAAVIDTDNRNFQGHGSEAPRGPFVDHRGFYSLPSTSTTGALGEELSNLHSQRADCSTESCLTSQHESPGGLTLEGSPISVPNKRMLSLESMAAAPLMWSEATTRSQGINVAQEGSELFGFQFLQEWNASKIPNGVFAAFTAQRVPGHKKKTQEKENDNFFSSNSCITDHTAKPRKEPFVAALTRETRRHCASPRSAPLFFIFARFRFWITWFR 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0023 404 FunFam Myb family transcription factor 40 98 - -
Lele14g0023 404 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 292 IPR044848 GO:0003700
Lele14g0023 404 Pfam MYB-CC type transfactor, LHEQLE motif 139 184 IPR025756 -
Lele14g0023 404 Gene3D - 40 98 - -
Lele14g0023 404 Pfam Myb-like DNA-binding domain 44 94 IPR001005 -
Lele14g0023 404 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 38 98 IPR017930 -
Lele14g0023 404 SUPERFAMILY Homeodomain-like 41 97 IPR009057 -
Lele14g0023 404 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 41 96 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0023 Lele-ChrLele14 473672 479720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0023 19 254 G2-like Transcription Factor Family AT3G24120 44.400 1.08e-60 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele14g0023 Myb_DNA-binding 1e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g0023 14 473672 479720 Lele15g2419 15 28468030 28470773 hybridization
Lele14g0023 14 473672 479720 Lele16g2376 16 24158249 24160427 hybridization