Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g0019 ATGTATCAGCCAAACAGTGTTCCTACTTTAAGTCTACCTGGAAGCAACTCATTGGTACATGGTCAGCAATTTGATTGTGGTGGCAGTACAATGGACCCAGTCAATGGAGGGAACAGTCTCACCAACAATCCCAATCTGAGCTCAAAGCAACGCTTACGCTGGACGCATGAGCTCCATGAACGCTTTGTTGATGCTGTGGCACAGCTTGGTGGGCCTGATCGTGCCACGCCTAAAGGTGTCCTCAGGGTGATGGGTGTACAAGGCTTAACAATATATCACGTCAAAAGCCATCTGCAGAAATATCGTCTTGCCAAATACCTCCCTGACTCGTCATCTGATGGGAAAAAAGCTGACAAGAAAGAAACTGGGGATATGCTTTCCAATCTAGATGGTTCACCAGGGATGCAAATTACTGAAGCACTAAAGCTGCAAATGGAGGTGCAGAAGCGATTACATGAGCAATTAGAGGCAAAACATGAGATAAAGTCCTCTCTTTATGTGAAACAGGTTCAAAGACAGCTACAACTTCGGATTGAAGCCCAGGGTAAATACTTGAAGAAGATAATTGAAGAGCAACAGCGGCTCAGTGGCGTTCTTTCCCAAGCACCCAGCTCGGGGGATGGTGATGCAGCCTCAGTGCCCGCTGACATCTGCCAAGACCCAGACAATAAGAATGACCCGTCAACCCCTGAATGCCCCCTTCGGGAAAAGGCTGCTAAAGAACGTACTCCGGTTAAGAGTCTTTCAATTGACGAATCCTTTTCATCTCACAACGAACCATTAACCCCGGATTCTGGTTGCCATGCTGGTTCCCCTACCAACAGCCCTAGAGAGAAGACGATAACAAAACAGCAACTGGTGAGCATGGAGGGAGCATATTCTAAACCTGAAATGGTGCTTCCACATCATATACTTGAGTCGAGCATGTCATCGAGTCAGCCATTAAACAGAGGGTTTCCTACCCATGAGCAGTTTGATCCTTCACTAGGAATACCTACTAGAAGTAATGAGGAACTGGAGAAGGTTGGCGGGGGCAATCTGTGA 1044 0.4722 MYQPNSVPTLSLPGSNSLVHGQQFDCGGSTMDPVNGGNSLTNNPNLSSKQRLRWTHELHERFVDAVAQLGGPDRATPKGVLRVMGVQGLTIYHVKSHLQKYRLAKYLPDSSSDGKKADKKETGDMLSNLDGSPGMQITEALKLQMEVQKRLHEQLEAKHEIKSSLYVKQVQRQLQLRIEAQGKYLKKIIEEQQRLSGVLSQAPSSGDGDAASVPADICQDPDNKNDPSTPECPLREKAAKERTPVKSLSIDESFSSHNEPLTPDSGCHAGSPTNSPREKTITKQQLVSMEGAYSKPEMVLPHHILESSMSSSQPLNRGFPTHEQFDPSLGIPTRSNEELEKVGGGNL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g0019 347 FunFam Myb family transcription factor 48 106 - -
Lele14g0019 347 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 49 104 IPR006447 GO:0003677
Lele14g0019 347 SUPERFAMILY Homeodomain-like 47 103 IPR009057 -
Lele14g0019 347 Coils Coil 138 158 - -
Lele14g0019 347 MobiDBLite consensus disorder prediction 308 347 - -
Lele14g0019 347 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 46 106 IPR017930 -
Lele14g0019 347 Pfam MYB-CC type transfactor, LHEQLE motif 135 162 IPR025756 -
Lele14g0019 347 Pfam MYB-CC type transfactor, LHEQLE motif 170 194 IPR025756 -
Lele14g0019 347 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 43 336 IPR044848 GO:0003700
Lele14g0019 347 MobiDBLite consensus disorder prediction 248 280 - -
Lele14g0019 347 Pfam Myb-like DNA-binding domain 52 102 IPR001005 -
Lele14g0019 347 MobiDBLite consensus disorder prediction 109 125 - -
Lele14g0019 347 MobiDBLite consensus disorder prediction 229 247 - -
Lele14g0019 347 MobiDBLite consensus disorder prediction 108 133 - -
Lele14g0019 347 MobiDBLite consensus disorder prediction 21 46 - -
Lele14g0019 347 MobiDBLite consensus disorder prediction 199 280 - -
Lele14g0019 347 Gene3D - 48 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g0019 Lele-ChrLele14 441958 444136 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele14g0019 84 347 G2-like Transcription Factor Family AT2G01060 59.176 8.45e-88 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele14g0019 Myb_DNA-binding 2.3e-08 CL0123