Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2399 ATGGTTTCCTTATTAAGCGTTTCACTATTTCCTCCGTCCACACAGCATGGTGTCTCTCGATCGACTAAATTCGCGGCTGCAGATGCAAGGGCGATAAGTTCATTCTATGCTAGGCAAAGCAACGAGCATAGGAAGGCTGTTTGTGCTTGTGTGGCTTCTCCGCGGAACTTGATGGGCGACGAGTCATCGGCGATTAAATTTAATGATTCTTCTAAATCAGAACACTTAAACACAATAGGGGATCCTGAGGACGATTCTGATGTTCTTATTGAGTGTAAAGAAGTATACAAGGCTTTTGGGGAAAAGAAAATCCTAAATGGTGTGAGCTTCAAGATCAGACATGGTGAATCTGTTGGGATAATTGGTCCCTCTGGGACTGGCAAATCTACTGTTTTGAAGATTATTGCAGGATTGCTTGCTCCGGACAAGGGAGAGGTTTACATTCGAGGTAAAAAGAGGGCTGGTTTGATAAGCGATGAAGAGATATCTGGTCTTCAGATTGGATTAGTGTTCCAAAGTGCAGCTCTTTTTGATTCTTTGACTGTACGTGAAAATGTTGGTTTTCTCCTGTATGAACACTCAAGCATGTCTGAGGATCAAATTTCAGAGCTTGTCAAGGAAAGCTTGGCAGCTGTTGGATTAAAGGGTGTTGATGATCGGCTGCCTTCGGAGTTGTCTGGGGGGATGAAAAAACGAGTTGCCTTAGCTCGGTCCATTATTTATGACACTACAAATGATTCAATAGAACCAGAGGTGCTTTTGTATGATGAACCAACTGCTGGACTGGATCCCATAGCTTCTACTGTAGTTGAGGATCTCATCCGCTCTGTTCACATAAAAGGACGTGATGCTCTTGGAAAACCAGGGAAGATTGCATCTTATGTAGTTGTCACCCACCAACATAGTACCATTAAAAGAGCTATTGACAGGTTATTATTTTTACACAAGGGTAAGATTGTCTGGGAAGGAATGACGCATGAATTTACTACATCGACTAATGCGATTGTCCAACAGTTTGCATCTGGTAGCCTGGATGGTCCCATCAAATATTAG 1053 0.4274 MVSLLSVSLFPPSTQHGVSRSTKFAAADARAISSFYARQSNEHRKAVCACVASPRNLMGDESSAIKFNDSSKSEHLNTIGDPEDDSDVLIECKEVYKAFGEKKILNGVSFKIRHGESVGIIGPSGTGKSTVLKIIAGLLAPDKGEVYIRGKKRAGLISDEEISGLQIGLVFQSAALFDSLTVRENVGFLLYEHSSMSEDQISELVKESLAAVGLKGVDDRLPSELSGGMKKRVALARSIIYDTTNDSIEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDALGKPGKIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHEFTTSTNAIVQQFASGSLDGPIKY 350
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2399 350 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524|GO:0016887
Lele13g2399 350 Gene3D - 79 343 IPR027417 -
Lele13g2399 350 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 331 IPR027417 -
Lele13g2399 350 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 5 350 - -
Lele13g2399 350 Pfam ABC transporter 105 260 IPR003439 GO:0005524
Lele13g2399 350 CDD ABC_Org_Solvent_Resistant 90 339 - -
Lele13g2399 350 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 90 341 IPR003439 GO:0005524
Lele13g2399 350 SMART AAA_5 114 318 IPR003593 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele13g2399 Lele-ChrLele13 29544759 29548845 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2399 89 319 Calmodulin-binding Proteins AT2G36910 29.218 1.20e-17 82.8