Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2368 ATGAAAAAGGAACCTCAAGCTCATGAATTGGTGTACTGTCAAGAGTGCCCACTAGAGAGGTCTAAGAATGAATGCATGCCTGAGCAATGCAAGGGGCATCTCATCAGGAAGTTCATTAAGGAATGTTGGAGGAAATGCGGTTGCGACATGGAGTGTGGAAATAGTATAGTGTTCTTTACCGGTGAAGGAAAGGACTGGGGCCTTAGAACACTGGAAGATTTGCCTAGGGGGTTCTTTATATGTGAATATGTTGGCGAAATATTAACGAACAATACACAGTTGTATGAAAGAATTGTGCACAAAAATGGCAATGACGGGCATACATATCCTGCAACCCTTGATGCAGACTGGGCCTCAGTAAGGGAGTTACAGGACGAGGAGGCGCTGTGTCTAGATGCAACATATAATGGACATGTTGCCAGATGTTCAGATGCAAATTTGATTGACATTCCCGTTGAAGTGGAGACTCCAGATCGCCATTATTATCTCATGTACATATTTAATTGA 507 0.43 MKKEPQAHELVYCQECPLERSKNECMPEQCKGHLIRKFIKECWRKCGCDMECGNSIVFFTGEGKDWGLRTLEDLPRGFFICEYVGEILTNNTQLYERIVHKNGNDGHTYPATLDADWASVRELQDEEALCLDATYNGHVARCSDANLIDIPVEVETPDRHYYLMYIFN 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2368 168 Gene3D SET domain 2 168 IPR046341 -
Lele13g2368 168 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 167 - -
Lele13g2368 168 SUPERFAMILY SET domain 10 167 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2368 Lele-ChrLele13 29372247 29372995 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2368 39 156 C2H2 Transcription Factor Family AT2G23740 33.835 1.46e-13 65.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele13g2368 None None None
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2362 13 29337815 29340987 Lele13g2368 13 29372247 29372995 CCT
Lele14g2293 14 27671211 27673602 Lele13g2368 13 29372247 29372995 CCT
Lele15g0057 15 343452 345849 Lele13g2368 13 29372247 29372995 CCT
Lele16g0059 16 375731 378113 Lele13g2368 13 29372247 29372995 CCT
Lele13g2368 13 29372247 29372995 Lele05g1349 05 8470778 8475811 CCT
Lele13g2368 13 29372247 29372995 Lele06g1211 06 7609311 7617306 CCT
Lele13g2368 13 29372247 29372995 Lele07g1407 07 8545899 8550525 CCT
Lele13g2368 13 29372247 29372995 Lele08g1205 08 7602111 7606901 CCT
Lele13g2368 13 29372247 29372995 Lele13g2368 13 29372247 29372995 ECH
Lele13g2368 13 29372247 29372995 Lele15g0052 15 314036 318275 hybridization
Lele13g2368 13 29372247 29372995 Lele16g0054 16 349118 355066 hybridization