Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2363 ATGAAAGATGGGGATTCCGTATTGTGCCATCTGCAGGGGACACCTGTAAATATTATTGTAGGGTCTCATGTCTGGGCTGAAGACCCGGATGTATCTTGGATTGATGGAGTGGTATCAAAAATCACTGGAAAAGATGCAGAAATTGAAACTAATGATGGAAAAAAGGTTGTCGCAAAATTATCAAAAATATACCCCAAAGATATGGAAGCTCCTGCTGGTGGAGTGGATGACATGACTAAGCTGTCATATTTACACGAGCCTGGGGTCCTGCAGAACTTAAAATCCAGATATGAATTGAATGAAATATATACTTATACTGGAAATATTTTAATTGCGATAAATCCATTCCAAAGACTTCCTCATATCTATGATGCTCACATGATGCAACAATATAAGGGAGCACCATTTGGAGAACTAAGTCCTCATGTGTTTGCAGTTGCTGATGTTGCATTTAGGGCAATGGTTATTGAAGGAAAAAGCAATTCAATTCTGGTCAGTGGGGAAAGTGGAGCTGGTAAAACTGAAACTACAAAAATGCTTATGAGATACCTTGCTTACCTAGGTGGTAGGGCTGCTACTGAAGGAAGAACAGTTGAACAACAAGTTCTTGAATCAAATCCAGTTCTTGAAGCATTTGGCAATGCAAAAACAGTCAGGAATAACAACTCCAGCCGTTTCGGAAAATTTGTTGAGATCCAATTTGATAAAAGTGGAAGAATCTCAGGAGCGGCAATCCGAACTTACCTTCTGGAGAGGTCTCGAGTTTGCCAAATTAATGATCCTGAACGGAACTACCATTGCTTCTATCTTCTTTGTGCTGCACCACAGGAGGAAATAGAGAAATACAAATTAGGACCTCCAAAATCATTCCATTACCTTAACCAGTCAAATTGTTATGAACTGGCTGATTCAAGTGATGCTCGTGAGTATCTTGCCACCAGGAGAGCTATGGATATCGTTGGAATAAGCCAAAAAGATCAGGAAGCAATTTTCAGAGTTGTTGCTGCTATTCTCCATCTAGGTAATATTGCTTTTTCTAAAGGAAAAGAAGTTGACTCATCAGTTCCCAAAGATGACAAAGCAAAATTCCACCTGGCAACAACTGCCGAACTTCTCATGTGTAATGCTGATGCCTTGGAAGATGCTTTATGTAAACGTGTGATGATCACCCCTGAAGAAGTTATAAAGCGAAGCCTTGATCCCCAAAGTGCGGCGATAAGTAGAGATGGCTTGGCTAAAACCATTTATTCTCGGCTATTTGACTGGCTGGTGGACAAGATTAATAGTTCAATCGGACAAGATCCTAATTCCAAATCTTTGATTGGAGTCCTTGATATCTATGGTTTTGAAAGCTTTAAAACTAACAGTTTTGAGCAGTTTTGTATTAATTTCACGAATGAGAAGTTGCAGCAGCATTTCAATCAGCACGTCTTTAAAATGGAACAAGAAGAATATACAAAGGAGCAGATTAATTGGAGCTATATTGAATTTGTTGATAATCAAGATGTTCTGGATCTCATTGAAAAGAAACCTGGAGGAATCATCGCTCTCCTTGATGAAGCTTGCATGTTTCCTAAGTCAACACACGAAACATTTGCTAACAAGCTTTATCAAACATTCAAGAATCACAAGCGCTTTATAAAGCCGAAATTGTCTCGATCAGATTTCACCATTTCTCATTATGCTGGCGAGGTGTTATACCAGTCTAATCAATTTTTAGACAAAAACAAGGATTATGTGGTTCCTGAACATCAAGATTTGTTGGGTGCTTCCAAATGTTCCTTTGTAGCAGGACTTTTCCCTCCGCTTCCAGAAGAGTCATCTAAATCTTCCAAATTTTCTTCAATTGCATCCCGTTTTAAGCTCCAACTACAGTCACTAATGGAAACACTAAACTCTACAGAGCCTCATTACATCAGATGTGTGAAACCAAACAACCTTCTCAAGCCTGCAATATTTGAGAATGCCAACATCATGCAACAACTTCGCTGTGGTGGTGTTTTAGAAGCAATCAGAATCAGTTGTGCTGGCTATCCTACTCGCCGTCCTTTCTTTGAATTTATAAATCGATTTGGCCTCCTGGCCCCAGAGGCCATGGAAGGCAACACCGAAGAAAAGGTTGTTTGCCAAAAGATTCTGGAAAAGATGGAGCTAAAAGGGTATCAGATTGGTAAAACAAAGGTATTCCTGAGAGCTGGTCAAATGGCTGAACTGGATGCACGGAGAGCTCAAGTTCTCAGCAATGCAGCAAAAATTATCCAACGTCGCATACGAACCCATCAAGCTCGCAATCATTATCTTCGTTTGCGAATGGTTACCATATACATGCAGTCTGTGTGTAGAGGAAGGCTAGCATGCAAACTCTTTGACAACATGAGAAAGGTGGCTGCTGCTAAGAAAATTCAGAAGAACGTGCGCCGATATGTAGCTAGGAAGGCCTATAAAAGACTCCATGCAACAGTACTTACCTTGCAAACGGGTTTAAGGGCAATGGCTGCACGGAAGGAATTCAGATTTAGGAAGCAGTCTAAAGCTGCCATTGCTATTCAGGCTCGGTGGCGATGCCACAAAACTTCATCATATTATAAGAGGCTCAAGAAAGCTGCAATAACTACACAATGCAGATGGAGAGGCCGTGTAGCAAGGAGGGAACTTAGGAAGCTAAAAATGGCAAGTTTCTTTACCATGATTCTTCTAAAGTTTGCTGCGAGAGAAACTGGTGCACTTCAAGAAGCAAAGGATAAGCTTGAAAAACGAGTGGAGGAACTCACTTGGCGTCTCCAACTAGAAAAAAGTTTAAGGACCAACCTAGAAGAAGCCAAAGCACAAGAGATGGCAAAACTGCAGAATTCATTAAAGGAGATGCAGGCCAAAGTTGACGAAACGAACGCTTTACTTCTCAAAGAGCGAGAGAATGCAAAGAAAGCTGTTGAAGAAGCGCAAGCGCCTCCTGTTGTTCAGGAAACCCAGGTTCTTGTTGAAGACACACAAAAAATTGAATCACTAACCGCAGAAGTTGAGAGCCTGAAGACCTCACTCCAGTCAGAAAAAGAGAGAGCAGACGACTTTGAAAGAAAATACAATGAAGCCCAAGTCTCTAGTGAAGAAAGGGGTAAAAAATTAGAAGACACAGAGAAGAAGGTTCGTCAGCTACAAGAATCATTGAACAGGCTAGAAGAGAAGATTACTAATTTAGAATCGGAGAATCAGGTTCTACGTCAACAAGCTGTATCCATGGCACCTAATAAGTTCCTTTCAGGACGCTCCAGATCTATTGTTCAGAGAGGTGCTGAAGGTGGCGTTCATGTTGGAGGGGAAGCAAAGGCACCTTTGGATCTTCATAGCCCATCAATGATTCAGAGGGAACACTACGAAATGGAGGATAGGCCACAGAAGTCACTAAATGAGAAACAGCAGGAGAATCAAGAGTTACTCATCAGATGTATCGCACAACATCTAGGCTTTGCTGGGAACAGGCCAATTGCAGCCTGTATCATATACAAATGCCTCTTGCACTGGCGATCATTTGAAGTAGAGCGTACTAGCGTGTTTGATCGTATAATTCAAACTATTGGCCATGCAATTGAGACCCAGGATAACAATGACATCTTGGCTTACTGGTTATCGAACGCCTCTACACTTCTCTTGCTACTCCAGCGAACACTCAAGGCAAGCGGCGCTGCTGGAATGGCTCCGCAACGGCGTCGATCTTCATCAGCGACACTATTTGGGAGGATGACACAAAGTTTCCGTGGAGCACCATCGGGAGTCAACCTTGCCCTAATCAATGGTAGCGGCGGTATAGATACATTGCGACAAGTTGAAGCCAAGTACCCAGCTCTTCTTTTTAAACAGCAGCTTACAGCATATGTGGAAAAGATATATGGGATGATTCGAGATAACTTGAAGAAAGAGATATCTCCCTTGCTTGGATTATGCATCCAGGCACCGAGAACATCAAGAGCAAGCTTGGTTAAAGGACGCTCTGTTGCAAACACGGAAGCCCAGCGAGCTTTGATTGCTCACTGGCAGGGGATAGTGAAGAGCCTCGGGAACTTCCTCAATACTTTAAAAGCAAACCATGTTCCTCCATTTTTGGTTCGGAAGGTGTTCACTCAAATTTTTTCTTTTATCAATGTGCAGCTATTCAACAGTCTTCTTTTAAGACGCGAGTGCTGCTCATTCAGCAATGGGGAATATGTGAAGGCTGGTTTGGCGGAATTGGAGCACTGGTGTTATAAAGCAACGGACGAGTATGCAGGTCTATCCTGGGATGAGCTCAAACATATTAGGCAGGCCATTGGGTTCCTGGTTATACATCAGAAACCAAAGAAAACGCTGGATGAAATAAGTCATGACCTGTGCCCGGTGCTGAGTATACAGCAGCTATATCGGATAAGTACCATGTACTGGGATGACAAATATGGCACTCATAGCGTGTCCGCCGAGGTAATATCCAATATGAGAGTGCTCATGACTGAAGATTCAAACAACGCAGTCAGTAATTCTTTCCTGTTGGATGATGATTCCAGTATTCCATTTTCTGTTGATGACATATCAAAGTCAATGGAGCAAATAGACATCGCGGATATTGAACCGCCACCACTGATCCGAGAGAACTCTGGCTTCAGTTTCTTGTTGCCACGCATAGATTGA 4656 0.4223 MKDGDSVLCHLQGTPVNIIVGSHVWAEDPDVSWIDGVVSKITGKDAEIETNDGKKVVAKLSKIYPKDMEAPAGGVDDMTKLSYLHEPGVLQNLKSRYELNEIYTYTGNILIAINPFQRLPHIYDAHMMQQYKGAPFGELSPHVFAVADVAFRAMVIEGKSNSILVSGESGAGKTETTKMLMRYLAYLGGRAATEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGRISGAAIRTYLLERSRVCQINDPERNYHCFYLLCAAPQEEIEKYKLGPPKSFHYLNQSNCYELADSSDAREYLATRRAMDIVGISQKDQEAIFRVVAAILHLGNIAFSKGKEVDSSVPKDDKAKFHLATTAELLMCNADALEDALCKRVMITPEEVIKRSLDPQSAAISRDGLAKTIYSRLFDWLVDKINSSIGQDPNSKSLIGVLDIYGFESFKTNSFEQFCINFTNEKLQQHFNQHVFKMEQEEYTKEQINWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSTHETFANKLYQTFKNHKRFIKPKLSRSDFTISHYAGEVLYQSNQFLDKNKDYVVPEHQDLLGASKCSFVAGLFPPLPEESSKSSKFSSIASRFKLQLQSLMETLNSTEPHYIRCVKPNNLLKPAIFENANIMQQLRCGGVLEAIRISCAGYPTRRPFFEFINRFGLLAPEAMEGNTEEKVVCQKILEKMELKGYQIGKTKVFLRAGQMAELDARRAQVLSNAAKIIQRRIRTHQARNHYLRLRMVTIYMQSVCRGRLACKLFDNMRKVAAAKKIQKNVRRYVARKAYKRLHATVLTLQTGLRAMAARKEFRFRKQSKAAIAIQARWRCHKTSSYYKRLKKAAITTQCRWRGRVARRELRKLKMASFFTMILLKFAARETGALQEAKDKLEKRVEELTWRLQLEKSLRTNLEEAKAQEMAKLQNSLKEMQAKVDETNALLLKERENAKKAVEEAQAPPVVQETQVLVEDTQKIESLTAEVESLKTSLQSEKERADDFERKYNEAQVSSEERGKKLEDTEKKVRQLQESLNRLEEKITNLESENQVLRQQAVSMAPNKFLSGRSRSIVQRGAEGGVHVGGEAKAPLDLHSPSMIQREHYEMEDRPQKSLNEKQQENQELLIRCIAQHLGFAGNRPIAACIIYKCLLHWRSFEVERTSVFDRIIQTIGHAIETQDNNDILAYWLSNASTLLLLLQRTLKASGAAGMAPQRRRSSSATLFGRMTQSFRGAPSGVNLALINGSGGIDTLRQVEAKYPALLFKQQLTAYVEKIYGMIRDNLKKEISPLLGLCIQAPRTSRASLVKGRSVANTEAQRALIAHWQGIVKSLGNFLNTLKANHVPPFLVRKVFTQIFSFINVQLFNSLLLRRECCSFSNGEYVKAGLAELEHWCYKATDEYAGLSWDELKHIRQAIGFLVIHQKPKKTLDEISHDLCPVLSIQQLYRISTMYWDDKYGTHSVSAEVISNMRVLMTEDSNNAVSNSFLLDDDSSIPFSVDDISKSMEQIDIADIEPPPLIRENSGFSFLLPRID 1551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2363 1551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 47 796 IPR027417 -
Lele13g2363 1551 Gene3D Kinesin motor domain 76 673 IPR036961 -
Lele13g2363 1551 ProSiteProfiles Dilute domain profile. 1185 1494 IPR002710 -
Lele13g2363 1551 MobiDBLite consensus disorder prediction 1020 1045 - -
Lele13g2363 1551 Gene3D Myosin VI head, motor domain, U50 subdomain 323 612 - -
Lele13g2363 1551 ProSiteProfiles IQ motif profile. 794 823 IPR000048 GO:0005515
Lele13g2363 1551 CDD MYSc_Myo11 87 731 IPR036018 -
Lele13g2363 1551 CDD MyosinXI_CBD 1136 1517 IPR037975 GO:0007015
Lele13g2363 1551 PRINTS Myosin heavy chain signature 160 185 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele13g2363 1551 PRINTS Myosin heavy chain signature 440 468 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele13g2363 1551 PRINTS Myosin heavy chain signature 103 122 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele13g2363 1551 PRINTS Myosin heavy chain signature 493 521 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele13g2363 1551 PRINTS Myosin heavy chain signature 207 234 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele13g2363 1551 FunFam Myosin heavy chain 263 318 - -
Lele13g2363 1551 PANTHER MYOSIN 65 1482 - -
Lele13g2363 1551 FunFam Class V myosin 450 586 - -
Lele13g2363 1551 ProSiteProfiles IQ motif profile. 817 846 IPR000048 GO:0005515
Lele13g2363 1551 Pfam Myosin N-terminal SH3-like domain 20 62 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele13g2363 1551 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 19 68 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele13g2363 1551 Coils Coil 899 979 - -
Lele13g2363 1551 SMART DIL_2 1369 1476 IPR002710 -
Lele13g2363 1551 SMART iq_5 841 863 IPR000048 GO:0005515
Lele13g2363 1551 SMART iq_5 793 815 IPR000048 GO:0005515
Lele13g2363 1551 SMART iq_5 745 767 IPR000048 GO:0005515
Lele13g2363 1551 SMART iq_5 768 790 IPR000048 GO:0005515
Lele13g2363 1551 SMART iq_5 816 838 IPR000048 GO:0005515
Lele13g2363 1551 SMART iq_5 864 886 IPR000048 GO:0005515
Lele13g2363 1551 ProSiteProfiles IQ motif profile. 865 892 IPR000048 GO:0005515
Lele13g2363 1551 FunFam unconventional myosin-Va 748 795 - -
Lele13g2363 1551 ProSiteProfiles IQ motif profile. 842 871 IPR000048 GO:0005515
Lele13g2363 1551 Gene3D - 263 321 - -
Lele13g2363 1551 Gene3D - 450 634 - -
Lele13g2363 1551 SMART MYSc_2a 68 744 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele13g2363 1551 ProSiteProfiles Myosin motor domain profile. 73 743 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele13g2363 1551 Pfam DIL domain 1370 1473 IPR002710 -
Lele13g2363 1551 ProSiteProfiles IQ motif profile. 746 773 IPR000048 GO:0005515
Lele13g2363 1551 FunFam unconventional myosin-Va 796 843 - -
Lele13g2363 1551 Coils Coil 992 1075 - -
Lele13g2363 1551 FunFam Myosin 2 323 437 - -
Lele13g2363 1551 Pfam Myosin head (motor domain) 75 731 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele13g2363 1551 Pfam IQ calmodulin-binding motif 844 863 IPR000048 GO:0005515
Lele13g2363 1551 Pfam IQ calmodulin-binding motif 867 886 IPR000048 GO:0005515
Lele13g2363 1551 Pfam IQ calmodulin-binding motif 748 766 IPR000048 GO:0005515
Lele13g2363 1551 Pfam IQ calmodulin-binding motif 796 815 IPR000048 GO:0005515
Lele13g2363 1551 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 793 892 IPR027417 -
Lele13g2363 1551 FunFam unconventional myosin-Va 844 892 - -
Lele13g2363 1551 Gene3D - 678 744 - -
Lele13g2363 1551 Gene3D - 797 843 - -
Lele13g2363 1551 Gene3D - 745 796 - -
Lele13g2363 1551 Gene3D - 844 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2363 Lele-ChrLele13 29343130 29352612 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2363 13 1551 Myosins gene family AT1G54560 83.517 0.0 2687
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2363 13 29343130 29352612 Lele13g1895 13 26716916 26719753 CCT
Lele13g2363 13 29343130 29352612 Lele14g1833 14 25068165 25071046 CCT
Lele13g2363 13 29343130 29352612 Lele15g0513 15 2998325 3001155 CCT
Lele13g2363 13 29343130 29352612 Lele16g0533 16 2950334 2953194 CCT
Lele13g2363 13 29343130 29352612 Lele13g2363 13 29343130 29352612 ECH
Lele13g2363 13 29343130 29352612 Lele15g0056 15 331728 341994 hybridization
Lele13g2363 13 29343130 29352612 Lele16g0058 16 369675 373629 hybridization