Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2362 ATGCAGCAGCACCTGATGCAGATGCAGCCCATGATGGCAGCTTACTACCCCAGCAACGTCACCACTGATCACATTCAACAGTACTTGGACGAGAACAAGTCCTTAATTTTGAAGATTGTGGAAAGCCAAAATTCTGGCAAATTGAGCGAGTGTGCGGAGAACCAAGCAAGGCTGCAGAGAAACCTCATGTACCTAGCCGCCATAGCTGATTCTCAACCTCAGCCACCTACCATGCCCGGTCAGTACCCAAGTGGTGGGGGAATAATGCAGCAGGGAACGCAGTACATGCCGGGCCAGCAAGCTCACCAAATGACGCAGCAACAGCTAATGGTTGCTCGATCCTCCCTCTTGTATGCTCAACAGCCCTACTCGTCACTTCAACAACAGCAAGCCTTGCAGAGCCAACTGGGTATGAGTTCAGGTGCGGCTCCTTCGGGCCTTCACATGATGCAGTCTGAAGCAGCGTCTGCATTTCCTGAGTTTGTTCGCACCGCCAAGCCTGATCTTGCCACTTCCGCCGCCTCCGAAGGCGGTGAAACCCTCTACCTCAAGCCTTCCGATGATGCCAACTAG 573 0.5323 MQQHLMQMQPMMAAYYPSNVTTDHIQQYLDENKSLILKIVESQNSGKLSECAENQARLQRNLMYLAAIADSQPQPPTMPGQYPSGGGIMQQGTQYMPGQQAHQMTQQQLMVARSSLLYAQQPYSSLQQQQALQSQLGMSSGAAPSGLHMMQSEAASAFPEFVRTAKPDLATSAASEGGETLYLKPSDDAN 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2362 190 PANTHER SYNOVIAL SARCOMA ASSOCIATED SS18 PROTEIN 1 150 IPR044779 GO:0003713
Lele13g2362 190 MobiDBLite consensus disorder prediction 171 190 - -
Lele13g2362 190 Pfam SSXT protein (N-terminal region) 19 74 IPR007726 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2362 Lele-ChrLele13 29337815 29340987 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2358 13 29319269 29324212 Lele13g2362 13 29337815 29340987 CCT
Lele14g2290 14 27655012 27659773 Lele13g2362 13 29337815 29340987 CCT
Lele15g0060 15 358037 363837 Lele13g2362 13 29337815 29340987 CCT
Lele16g0064 16 399884 401718 Lele13g2362 13 29337815 29340987 CCT
Lele13g2362 13 29337815 29340987 Lele13g2368 13 29372247 29372995 CCT
Lele13g2362 13 29337815 29340987 Lele14g2297 14 27700061 27710881 CCT
Lele13g2362 13 29337815 29340987 Lele15g0052 15 314036 318275 CCT
Lele13g2362 13 29337815 29340987 Lele16g0054 16 349118 355066 CCT
Lele13g2357 13 29315182 29317749 Lele13g2362 13 29337815 29340987 CCT
Lele14g2289 14 27651189 27653756 Lele13g2362 13 29337815 29340987 CCT
Lele15g0062 15 365122 367689 Lele13g2362 13 29337815 29340987 CCT
Lele16g0065 16 402989 405556 Lele13g2362 13 29337815 29340987 CCT
Lele13g2362 13 29337815 29340987 Lele15g0057 15 343452 345849 hybridization
Lele13g2362 13 29337815 29340987 Lele16g0059 16 375731 378113 hybridization