Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2358 ATGATTTCGGGTCAAGTGTACAGAACAAGGAACACAACACAGAGGGGGAGAGAGCGAGGGAGGGAGAGCGGCGAGGAGGAGGAGAAGGCCTCCCGAGAGATCTCGTCAGATCGTGACCGAAATCTTCACATTTTTAGCTGCTTTTGGGTCATGGGGAGGGAAGTTACTGGCATACATGTTGTGGCCACTAGGCCAAATCGTACCGTAGCGACTACAAATGGCAGTTCCAATGATAAAGTACATGGTTCTCCCAGAATTGCTGAAGTTAAGCTTGAAACGAAGGATCATGAGGTAATGGAATGTACTGAAATTAATTCTTTTATTGAGAAATGTCATGAGAACAAGGATGTCTTGAGTGCTGAAAACACAAACCAGTTTGCTGACTTGACTGAGGAGAAGAATGAGAAATCAGAAGCACAGATGACGGGTGGCAGTAAAAAGCTAAGTTCACCTGCAACAAGATCTACAGCTGTGGAATTGGAACCTACAAGCCACTCTGTTCCACTGTCACCTGATATGGCTGCTGAAAAGAATGGCTCTGACAGTCTGAGTGTTGGTGCTGAAGCTGTTATGACTGGTTTGAACACGTCATCAAATGCTAACAACACACATTCACCAAACTCAACTAAACATTTGCAGACAAACTCGCCTTTTTCATCAAGGAAATCCTTGCTCCATGATGATGATGATAATTGGTCTCTTGCTTCCTCTGCTGCATCTGCCCGCACAGCTAGATCAAGGGTAACTGTAGGTTCAGCGCCTACATTTAGATGCTCAAACCGTGCAGAGAAACGGAAGGAGTTTTATCTGAAGTTAGAGGAGAAACATCGAGCTCTTGAAGAAGAAAAAAACCAATACAAAGCAAGGCAGAAGGAAGAGGAAGAAGCAGCCATCAAGCAGTTGAGGAAGAACTTGGTAATCAGAGCAAAGCCAGTCCCGAGTTTCTACTATGAAGGACCTCCTCCCAAGGCTGAACTTAGGAAGCTGCCACTGACTCGGCCTAAGTCACCAAAACTATCAAGGAGAAAGAGCTCTGGTGATGCTTTCAGCTCATCTTCGGAAGTTTGTTCCCGGCAACAACGCCACAGCCTTGGTAGTCGGAAAGAGGCGTCTAGCAGCCCTGTGACTCCAAAAACTAAGCAGCATGTTCTTGGACGTAAGAGCAATGGCAGTTGCGAGAAGTCAAAAGTGGGCAAGGAAACCAAATCAGCACCTCCTAAAATGACCCAGCAAACAAATGCAGACATATCGGTCCACTGA 1260 0.4603 MISGQVYRTRNTTQRGRERGRESGEEEEKASREISSDRDRNLHIFSCFWVMGREVTGIHVVATRPNRTVATTNGSSNDKVHGSPRIAEVKLETKDHEVMECTEINSFIEKCHENKDVLSAENTNQFADLTEEKNEKSEAQMTGGSKKLSSPATRSTAVELEPTSHSVPLSPDMAAEKNGSDSLSVGAEAVMTGLNTSSNANNTHSPNSTKHLQTNSPFSSRKSLLHDDDDNWSLASSAASARTARSRVTVGSAPTFRCSNRAEKRKEFYLKLEEKHRALEEEKNQYKARQKEEEEAAIKQLRKNLVIRAKPVPSFYYEGPPPKAELRKLPLTRPKSPKLSRRKSSGDAFSSSSEVCSRQQRHSLGSRKEASSSPVTPKTKQHVLGRKSNGSCEKSKVGKETKSAPPKMTQQTNADISVH 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2358 419 MobiDBLite consensus disorder prediction 404 419 - -
Lele13g2358 419 MobiDBLite consensus disorder prediction 12 36 - -
Lele13g2358 419 Pfam Targeting protein for Xklp2 (TPX2) domain 255 324 IPR027329 -
Lele13g2358 419 MobiDBLite consensus disorder prediction 141 163 - -
Lele13g2358 419 Coils Coil 265 304 - -
Lele13g2358 419 MobiDBLite consensus disorder prediction 310 419 - -
Lele13g2358 419 PANTHER PROTEIN WVD2-LIKE 3 71 418 IPR044806 GO:0000226|GO:0008017
Lele13g2358 419 MobiDBLite consensus disorder prediction 387 401 - -
Lele13g2358 419 MobiDBLite consensus disorder prediction 343 386 - -
Lele13g2358 419 MobiDBLite consensus disorder prediction 195 221 - -
Lele13g2358 419 MobiDBLite consensus disorder prediction 130 180 - -
Lele13g2358 419 MobiDBLite consensus disorder prediction 195 224 - -
Lele13g2358 419 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2358 Lele-ChrLele13 29319269 29324212 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2358 13 29319269 29324212 Lele13g2362 13 29337815 29340987 CCT
Lele13g2358 13 29319269 29324212 Lele14g2293 14 27671211 27673602 CCT
Lele13g2358 13 29319269 29324212 Lele15g0057 15 343452 345849 CCT
Lele13g2358 13 29319269 29324212 Lele16g0059 16 375731 378113 CCT
Lele13g2358 13 29319269 29324212 Lele06g1194 06 7523029 7526549 CCT
Lele13g2358 13 29319269 29324212 Lele07g1388 07 8443426 8448133 CCT
Lele13g2358 13 29319269 29324212 Lele08g1188 08 7514363 7517875 CCT
Lele13g2358 13 29319269 29324212 Lele15g0060 15 358037 363837 hybridization
Lele13g2358 13 29319269 29324212 Lele16g0064 16 399884 401718 hybridization