Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2357 ATGACCGACAACATACGCCTCCATTCCTTGTTCTCGGTCCTGTGTCTCCCCCTCGTCTTCAATGCCGTTCTAGTAAGGAGCCAAAACCCATCGTCGTTGTTCCTGGGATGTGGGTTGGCCGACGGTGGAGGCAAAGACGCAGACGGAAGGCAATGGAGCCCCGACAAAAAGTACCTATCAGGAGGTGATTCCAGCACGTTCAGAGCCTCCTACCAAGATCCTTCGCTCTCGTCCGAGGTTCCGTACATGACGGCTCGAGTTTTCACGTCCGAGGCCACCTACAAATTTCCCATTAGTTCCGACAAACGTTATTGGCTCAGGCTACACTTTTATCCCTCTGTCTATTCAAATTTCGATCCTGCCAATTCATATTTCTCGGCCACTGCAAATGGGATTACCCTCTTGAGCAATTTCAGCGCCTCCATTACTTGTCAAGCCCTCTCTCTAGCTTACATCGATAGAGAATATTCTCTCGCCCCTCTCAACTCAGATTCTCTCACCCTCACCTTCAAGCCTTCTGACAAGTACAAAGGGTCTTTCGCTTTTGTGAATGGCATTCAACTCATGGAAATGCCAGACTTGTTTGATTTGGCCACGCTGGTGGGTTTTGACCAAATGATGGATGCCAAAAGATTGCATTCGCAGACAATGTTCCGACTGAATGTTGGAGGACAATACATATCGCCATCCCAGGACTCTAATCTCACCAGAACGTGGTACGACGACACGCCATATATTTACGGTGCATCCACGGGGGTGACCACCCAAGCAGACAAGAGCGTCCAAATCAACTACCAAAGCATGCCACAGTACATTGCTCCTCCTACCGTCTACTCCACTTCGAGATCCATGGGAAGCGACAAGGATGTGAACTTGGAGTATAACCTCACGTGGGTTTTCCAAGTGGATCGTAATTCCATGTATCTCACAAGGTTACACTTCTGCGATTACACGTACGACAGAATCAACGAAATAACCTTCAATATATACGTGAATAATCAGACGGCGCAGTCCGGGGCGGATGTGATTGGATGGACGAGTGAGAAAGGTGTTCCGGTTTACAAGGACTACGTGGTATATGTACAGGATGGGCCCGGCGCCGACCAGCTCTGGCTTGCTCTCGACCCTGCAACTGAAACGAAGCCTGAATACTATGATGCGATTCTGAACGGGGTTGAGATATTCAAGCTCAACGATACAACCTTGGCGGGACCCAATCCTCAGCCTTCCGACATGCTAATGAAAGCACAGGAGGAGCAGCAAAAATCCTTCGGAAACAAGGATCAACAGAGTGCTCATCCAGCTATAATTGGTGGAGCTGCGGGAGGGGCAGCTTTACTAGCTGCACTGTGCGTTACGGTTTACCAGAGGCAAAAGAGAGTCCCAGGATCAGAGTCGCACACATCGAGCTGGCTTCCGCTCTATGGGAACACCCAAAGTGCCAGCAAATCCACGATTTCTGGCAGGAGCTCTGCTGGTGTTACCTTGTCGGCCACAGCTCAAGGTCTTTGCAGGTATTTCTCGTTGCCGGAGATAAAGCAAGCGACCAAGAATTTTGATGAGTCCAATGTTATTGGGGTTGGAGGATTTGGGAAGGTGTATAAAGGTGTGATTGATAATGGGTTTAAAGTGGCAATCAAGAGGTCCAATCCGCAATCGGAACAAGGCGTCAATGAGTTCCAAACTGAGATCGAGATGCTTTCCAAGCTTAGGCACAAGCATTTGGTCTCATTGATTGGGTTCTGTGAGGAAAATGGTGAGATGTGTCTGGTTTATGACTACATGGCTCGTGGCACTTTAAGGGAGCATGTTTACAAGGGAAACAAACCGGTCAATGCTCTCTCGTGGAAGCAAAGATTGGAGATTTGCATTGGAGCTGCCAGAGGACTTCACTACCTTCACACCGGGGCTACGTACACCATCTTTCACAGGGATGTCAAAACAACAAACATTCTTCTAGATGAAAACTGGGTCGCCAAGGTACTCTGTGCAAGGCCTGCTCTGAATCCTAGCCTTCCCAAGGAACAGGTGAGTCTGGCGGATTGGGCTCTGATCAACAAAAGAAGAGGGACGCTAGAGGATATAATAGACCCGAATCTCAAAGGAAAGATCCGCCCAGAAAGCTTAAAGAAGTTTGCAGATAGTGCTGAAAAGTGCTTGTCAGATCATGGAGTGCATCGTCCCTCAATGAATGATCTGTTATGGAATCTTGAACTTGCCCTGCAGCTGCAGGAAAATCCAGAGCGTGCGTATGAATGTGAGTTCGAAGAGATAAGCTTGAAGGGCAACGATGCTGGAACACATTATAAGAATGCAAGCCTTGGGGGTGAGCAGGAGAGGAGCAAGGAGTCGGGTGACAATTCTAATACCATCTTCTCACAAATTGTCAATCCCAAGGGACGATGA 2406 0.4855 MTDNIRLHSLFSVLCLPLVFNAVLVRSQNPSSLFLGCGLADGGGKDADGRQWSPDKKYLSGGDSSTFRASYQDPSLSSEVPYMTARVFTSEATYKFPISSDKRYWLRLHFYPSVYSNFDPANSYFSATANGITLLSNFSASITCQALSLAYIDREYSLAPLNSDSLTLTFKPSDKYKGSFAFVNGIQLMEMPDLFDLATLVGFDQMMDAKRLHSQTMFRLNVGGQYISPSQDSNLTRTWYDDTPYIYGASTGVTTQADKSVQINYQSMPQYIAPPTVYSTSRSMGSDKDVNLEYNLTWVFQVDRNSMYLTRLHFCDYTYDRINEITFNIYVNNQTAQSGADVIGWTSEKGVPVYKDYVVYVQDGPGADQLWLALDPATETKPEYYDAILNGVEIFKLNDTTLAGPNPQPSDMLMKAQEEQQKSFGNKDQQSAHPAIIGGAAGGAALLAALCVTVYQRQKRVPGSESHTSSWLPLYGNTQSASKSTISGRSSAGVTLSATAQGLCRYFSLPEIKQATKNFDESNVIGVGGFGKVYKGVIDNGFKVAIKRSNPQSEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENGEMCLVYDYMARGTLREHVYKGNKPVNALSWKQRLEICIGAARGLHYLHTGATYTIFHRDVKTTNILLDENWVAKVLCARPALNPSLPKEQVSLADWALINKRRGTLEDIIDPNLKGKIRPESLKKFADSAEKCLSDHGVHRPSMNDLLWNLELALQLQENPERAYECEFEEISLKGNDAGTHYKNASLGGEQERSKESGDNSNTIFSQIVNPKGR 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2357 801 FunFam receptor-like protein kinase FERONIA 481 594 - -
Lele13g2357 801 Gene3D - 35 192 - -
Lele13g2357 801 Gene3D - 212 398 - -
Lele13g2357 801 Gene3D Transferase(Phosphotransferase) domain 1 595 661 - -
Lele13g2357 801 Gene3D Transferase(Phosphotransferase) domain 1 662 744 - -
Lele13g2357 801 SUPERFAMILY Protein kinase-like (PK-like) 496 738 IPR011009 -
Lele13g2357 801 FunFam FERONIA receptor-like kinase 212 398 - -
Lele13g2357 801 Pfam Malectin-like domain 36 396 IPR024788 -
Lele13g2357 801 Pfam Protein tyrosine and serine/threonine kinase 523 661 IPR001245 GO:0004672|GO:0006468
Lele13g2357 801 SMART serkin_6 519 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g2357 801 ProSitePatterns Protein kinases ATP-binding region signature. 525 547 IPR017441 GO:0005524
Lele13g2357 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 641 653 IPR008271 GO:0004672|GO:0006468
Lele13g2357 801 ProSiteProfiles Protein kinase domain profile. 519 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g2357 801 MobiDBLite consensus disorder prediction 785 801 - -
Lele13g2357 801 FunFam FERONIA receptor-like kinase 32 192 - -
Lele13g2357 801 Gene3D Phosphorylase Kinase; domain 1 479 594 - -
Lele13g2357 801 MobiDBLite consensus disorder prediction 764 801 - -
Lele13g2357 801 PANTHER OS03G0124300 PROTEIN-RELATED 13 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2357 Lele-ChrLele13 29315182 29317749 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2357 33 801 Receptor kinase-like Gene Family AT3G51550 46.971 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Lele13g2357 Malectin_like 1.7e-34 CL0202
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2357 13 29315182 29317749 Lele13g2362 13 29337815 29340987 CCT
Lele13g2357 13 29315182 29317749 Lele14g2293 14 27671211 27673602 CCT
Lele13g2357 13 29315182 29317749 Lele15g0057 15 343452 345849 CCT
Lele13g2357 13 29315182 29317749 Lele16g0059 16 375731 378113 CCT
Lele13g2357 13 29315182 29317749 Lele15g0062 15 365122 367689 hybridization
Lele13g2357 13 29315182 29317749 Lele16g0065 16 402989 405556 hybridization