Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2343 ATGTTCGATGGAGTGCCAGAGCAGTTCCACCAATTCATAGTTCCAAGAAACTCACTTCCTCTTCAACTCTCCTTCCCTCCTTTCGATGCTTATAATAACCCTTCTCCTCATCACTTGCCCCTCCCACCACCACAACCGCCGCCGCCAAATCTCTTGTCCACATTGCACCACAAAGATGAACAACACGAGCAGCAAGAAACTAGCATGAACTTACAGATTAATGAAAGAGAGCCACAAATGGGCGAGCATGAGCTGATTGATTCCACCTGGACCAACGATGAAGTGCTTGCTCTTTTGAGGATCAGATCTAGCCTCGACGCTTGGTTCCCTGAGCTCCCTTGGGAACATGTTTCAAGGAAGCTTGCGGAGCTTGGATTTAAAAGGAGTGCAGAGAACTGCAAGGAGAAGTTCGAAGAAGAAACTAGTTACTTCAACAACATCCATTACACCAAGAACAGCTGTTACCGCTTTATTAGTGAGCTCGAACAGCTTTACCAACAACAAGAAGCATATCAAATACCCGGGGTCGAGGTTGAGGTTGGATCTCAAGAGAGTAAGCAGCTGCCGGAAAAGCCGACTGAGGAACAACACAGGGTGATGGATCACGCATTAGAAGACGGCTCAGGAAATGACGCATCATTGACCAAAAGATGTGAGGAAACGGTGAAAATGGTGGGGGCATCAAAGCGCAGGAAGCAAAAGAGGAACGGTAAGTTTGAGGTTTTGAAGGGTTTTTGTGAGAACATAGTGAATAAGATGATGGCGAAGCAAGAGCACATGCACAATAAGCTGCTGGAGGACATGTTTAAAAGAGACCAAGAGATATTCGCGAGAGGGGAAGCTTGGAAGAAACAGGAGATGGATAGGATGAACAGGGAGCTCGAAATGATGGCGAAAGAGCAGACTGTTGCGGGCCAAAGGCAAGCCGCCATTATTGATTTGTTGAAGAAAATTTCAGACCAGAGCCATTGCAACAAAACAGTATCAGACGATCCCAATCCAAATTCTTTGACTGCTTCTTCCCCATCGAACTCACAAAACCCTAACCCGTGTTGTAATTATACCGGGGAGAACAATCCGGAGCCGCCGCCACGCGTGGTTCTTAATTGTACATGCGAAGGTGCGTCAGATCAAAACCCTGATAGATCAAGCCAAGTACCCAACCCTTCCTCAATTGATGGTGCTCCAGCATTTACCCAGAACCCTAATTCAGTCGTTGCCAGGACAAATGGATTGCCCGTAAAAACAGCTTCGACGCATAAAGGCGTGTCAGATAATTCTACATGGAAAGAGAAAGAAAAGGTGGGAAGAAGGTGGCCAAGGGAGGAAGTGGTGGCGCTGATAAACCTGAGATGCAGTGAGAATGAAGAGAGAGAAGGAGGAGGGAGCAGCAGGGTTCCTCTGTGGGAGAGAATATCGGAAGGGATGAGGGAAATGGGGTACAAGAGAAGCGCCAAGAGGTGCAAAGAGAAATGGGAGAACATAAATAAGTACTTCAGGAAGACGAAGCATCTGAGTAAGAAAAGGTCGGTGGATTCTAGAACCTGTCCCTACTTCCATCAGCTCACTTCTTTGTATTCTCAAGGAATGTTTCATCAGCTTCATGATCATGATCATCGCCCCTCCCACTCTTCTCAAACTTAG 1644 0.469 MFDGVPEQFHQFIVPRNSLPLQLSFPPFDAYNNPSPHHLPLPPPQPPPPNLLSTLHHKDEQHEQQETSMNLQINEREPQMGEHELIDSTWTNDEVLALLRIRSSLDAWFPELPWEHVSRKLAELGFKRSAENCKEKFEEETSYFNNIHYTKNSCYRFISELEQLYQQQEAYQIPGVEVEVGSQESKQLPEKPTEEQHRVMDHALEDGSGNDASLTKRCEETVKMVGASKRRKQKRNGKFEVLKGFCENIVNKMMAKQEHMHNKLLEDMFKRDQEIFARGEAWKKQEMDRMNRELEMMAKEQTVAGQRQAAIIDLLKKISDQSHCNKTVSDDPNPNSLTASSPSNSQNPNPCCNYTGENNPEPPPRVVLNCTCEGASDQNPDRSSQVPNPSSIDGAPAFTQNPNSVVARTNGLPVKTASTHKGVSDNSTWKEKEKVGRRWPREEVVALINLRCSENEEREGGGSSRVPLWERISEGMREMGYKRSAKRCKEKWENINKYFRKTKHLSKKRSVDSRTCPYFHQLTSLYSQGMFHQLHDHDHRPSHSSQT 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2343 547 FunFam Trihelix transcription factor GT-2 90 146 - -
Lele13g2343 547 MobiDBLite consensus disorder prediction 372 401 - -
Lele13g2343 547 ProSiteProfiles Myb-like domain profile. 431 496 IPR001005 -
Lele13g2343 547 SMART sant 435 498 IPR001005 -
Lele13g2343 547 SMART sant 86 143 IPR001005 -
Lele13g2343 547 MobiDBLite consensus disorder prediction 36 51 - -
Lele13g2343 547 CDD GT1 437 503 - -
Lele13g2343 547 Pfam Myb/SANT-like DNA-binding domain 437 524 IPR044822 -
Lele13g2343 547 Pfam Myb/SANT-like DNA-binding domain 89 161 IPR044822 -
Lele13g2343 547 Gene3D - 439 501 - -
Lele13g2343 547 Gene3D - 90 146 - -
Lele13g2343 547 PANTHER FI21293P1 46 536 - -
Lele13g2343 547 ProSiteProfiles Myb-like domain profile. 82 141 IPR001005 -
Lele13g2343 547 MobiDBLite consensus disorder prediction 323 358 - -
Lele13g2343 547 MobiDBLite consensus disorder prediction 371 401 - -
Lele13g2343 547 MobiDBLite consensus disorder prediction 32 54 - -
Lele13g2343 547 MobiDBLite consensus disorder prediction 325 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2343 Lele-ChrLele13 29247457 29249565 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2343 1 528 Trihelix Transcription Factor Family AT5G28300 35.500 1.32e-78 257
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Lele13g2343 Myb_DNA-bind_4 1e-18 CL0123