Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2334 ATGGTCATTCTAAAGATCATTCTCTTAACTTCGAACTTTTCCACCACTCCCACCTCCTCCATGGCCGCAATCTCCTTACCTGAAGTCAATCCCTTGAAATGGAACCGAACCTTTCCCCTACAGTTATTCCCTCATCGCATCCCCGACACAAATCGCTCGCTCGTTCAACCACCTAATTTTTGCTCAATTCTGCGTTTGAAAGCTTTGCCTTCGCATAATTGTATCAAATGCTTGTTCTCGCAAAAGCCATCCGTACAATTGAGTTCTGAGCCCCTCGATGGAGAATCCTCTAAAACTCCCTTCGAGGTTATCGCCAATACAATATTGAATGCGATGAATGCCTTGAGGAAACCGGCGATAGCTGCGGTTTTGCTAGGGCTTTTATTGATGTATGATCCCAACCCGGCAATAGCCGCATCTGGAGGTCGAATGGGTGGAAGGTCCTTCTCTTCGCATTCTTCGTCTTCATTGTCTTCGAGGAGCTATTCGGTACCTAGGTCATCTAGCCCTGGCTTTTCGTATTCGGTGCCGTATTATGCACCTTCTCCTTTTGGGTTTGGTGGGGGCGGTGGCGGGTTCTATGTTGGTCCGGCGGTAGGTGTTGGAGTAGGTGCTGGGTCCAGTTTCTTCCTCATCTTGATGGGTTTCGCGGCGTTTATTTTGGTTTCTGGGTTTCTTTCAGATCGGTCTGAGGGTAGTGTGCTTACTGCCACCGAGAAAACTAGCGTGCTCAAGCTTCAGGTTGGGTTGTTGGGGATGGGGCGCTCGCTTCAAAGGGATTTGAATAGGATTGCAGAAGTTGCAGATACGTCATCTCCTGAAGGTTTAAGCTATGTATTGACAGAGACAACGCTAGCTTTGCTTCGACATCCTGATTACTGCATCTCAGCATATTCATCCGTCGACTTAAAGCGAAGTGTTGAGGATGGAGAGAAACGCTTCAATCAACTTTCAATTGAAGAGCGTGGAAAATTTGATGAGGAGACACTTGTCAATGTGAACAGCATAAAAAGGCAAAGCACAAGAAGCCAAAGAGCAAACGGATTTAGCAATGAGTACATTGTGATTACAATCTTGGCAGCAGCTGAAGGAGTACATAAACTTCCTACCATCAATGGGAGTGGAGACTTGAAGGAAGCCTTACAAAAGCTCGGATCCATTTCTTCGAGCAAATTATTAGCAGTCGAGGTGTTATGGACTCCCCAGAATGAAAACGACACTCTCTCAGAACGAGAACTCCTTGAAGATTACCCACTCTTGCGCCCTTTGTGA 1272 0.4662 MVILKIILLTSNFSTTPTSSMAAISLPEVNPLKWNRTFPLQLFPHRIPDTNRSLVQPPNFCSILRLKALPSHNCIKCLFSQKPSVQLSSEPLDGESSKTPFEVIANTILNAMNALRKPAIAAVLLGLLLMYDPNPAIAASGGRMGGRSFSSHSSSSLSSRSYSVPRSSSPGFSYSVPYYAPSPFGFGGGGGGFYVGPAVGVGVGAGSSFFLILMGFAAFILVSGFLSDRSEGSVLTATEKTSVLKLQVGLLGMGRSLQRDLNRIAEVADTSSPEGLSYVLTETTLALLRHPDYCISAYSSVDLKRSVEDGEKRFNQLSIEERGKFDEETLVNVNSIKRQSTRSQRANGFSNEYIVITILAAAEGVHKLPTINGSGDLKEALQKLGSISSSKLLAVEVLWTPQNENDTLSERELLEDYPLLRPL 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2334 423 PANTHER MYELIN-ASSOCIATED OLIGODENDROCYTE BASIC PROTEIN 88 423 - -
Lele13g2334 423 Pfam Protein of unknown function (DUF1517) 241 423 IPR010903 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2334 Lele-ChrLele13 29189336 29192718 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2334 13 29189336 29192718 Lele13g2344 13 29251438 29260483 CCT
Lele13g2334 13 29189336 29192718 Lele14g2276 14 27593829 27598439 CCT
Lele13g2334 13 29189336 29192718 Lele15g0071 15 427009 432172 CCT
Lele13g2334 13 29189336 29192718 Lele16g0076 16 457972 465597 CCT
Lele13g2334 13 29189336 29192718 Lele13g2334 13 29189336 29192718 ECH
Lele13g2334 13 29189336 29192718 Lele15g0081 15 480132 484167 hybridization
Lele13g2334 13 29189336 29192718 Lele16g0088 16 521993 525559 hybridization