Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2333 ATGTATGTCCCTGTAGCTTGCCAAGAATGTGGACCTCATTTCATATCAGGATCATCCCAAAATGCACGTGCCCCATCCCCTTGCACGTGCGGTTTCATTCATCCACGGGCGTATTGCAAGCGACCGTCCTCCCCAGCGACTGTTCTCTCCTGCGATTCACAGCTCGCTGAACAAATGGCGGACAAGGCGGTTACTGTGAGAACCCGAAAGTTCATGACCAACCGTCTGTTGTCAAGAAAACAATTTGTCATTGATGTACTTCATCCTGGGAGGCCAAACGTATCCAAGGCGGAGCTTAAGGAGAAGCTAGCAAGGATGTACGATGTCAAAGACCCTAATGCGATTTTCGTCTTCAAGTTTAGAACTCACTTTGGAGGCGGGAAATCAACTGGATTTGGTTTAATTTACGATTCTGTTGAAAATGCAAAGAAGTATGAGCCCAAGTACAGGCTTATCAGGAATGGACTCTCTACGAAGGTCGAGAAGTCAAGGAAGCAGATGAAGGAGCGCAAGAATCGTGCTAAGAAAATTCGTGGAGTAAAGAAGACTAAGGCATCTGAAGCTGCCAAGAAGAAATGA 579 0.4663 MYVPVACQECGPHFISGSSQNARAPSPCTCGFIHPRAYCKRPSSPATVLSCDSQLAEQMADKAVTVRTRKFMTNRLLSRKQFVIDVLHPGRPNVSKAELKEKLARMYDVKDPNAIFVFKFRTHFGGGKSTGFGLIYDSVENAKKYEPKYRLIRNGLSTKVEKSRKQMKERKNRAKKIRGVKKTKASEAAKKK 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2333 192 FunFam 40S ribosomal protein S24 59 192 - -
Lele13g2333 192 PANTHER 40S RIBOSOMAL PROTEIN S24 59 189 IPR001976 GO:0003735|GO:0005840|GO:0006412
Lele13g2333 192 MobiDBLite consensus disorder prediction 168 192 - -
Lele13g2333 192 Gene3D - 55 191 - -
Lele13g2333 192 MobiDBLite consensus disorder prediction 156 192 - -
Lele13g2333 192 Pfam Ribosomal protein S24e 83 161 IPR001976 GO:0003735|GO:0005840|GO:0006412
Lele13g2333 192 ProSitePatterns Ribosomal protein S24e signature. 124 146 IPR018098 -
Lele13g2333 192 Hamap 30S ribosomal protein S24e [rps24e]. 62 164 IPR001976 GO:0003735|GO:0005840|GO:0006412
Lele13g2333 192 SUPERFAMILY Ribosomal proteins S24e, L23 and L15e 64 166 IPR012678 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2333 Lele-ChrLele13 29187121 29189219 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2333 59 191 Cytoplasmic Ribosomal Protein Gene Family AT5G28060 86.466 4.65e-83 240