Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2331 ATGCTTTCGTCGTTGGTTTCTTGGATCTTGGCGTCCTCTCCTTCCTCCTCCTCTTCCGAGGAAGAAGATAACTTTGTGGACGACGGAGATCATTACGAGAACGTCGGCGAGAACGAGCATTTCCTCCGCAAAGCCGAGGAGCTTCCTTCAACATCATGCGCTGGTGATACTAAAACCACTCCCGTTGCCCTTGCCACTGCCGGGGCCGACGGCTCTTACATTCCCGACACGGGCACCGGGTCTAGAAAACGGCGGCGCATCAGCCATTCTTATCCCCGGAGACAACATCAGAGGCTGTGGACGAAGCAAGAAGAGATCGAACTCTTAAGGGGATATCTGGGTTATATCAAGCAGAACAGATGGGGCACCACATCTCTCCAAAACGACGTAACATTCTTCCACGATCACATCAGGCCTAAATTGAATACGGATTTCAACAAGAATCAACTCGTCCAGAAGCTTCGAGGATTAAAGAGAAAACACAAGACCGTTTTAGACAGGGTCAACTCCGGCAGGGAAGTTTGGCACAAGAGCCCCCAGGAGGAGGCCATTTTTGACATTTCCCAGAGGATCTGGGGCAAGAATCGAGACAGGGAATCAGGCCAGGATCCTGATGCCGATAAGAACGAGGTGAATAGTGAAGAAGATGGCGATGAATCGGGGCATTTGAATGAGGAGAACAAAGATATAAAGAAGCTGATAGAGGAGACGATGAGGTCGTGTTTGTCACCATTGGACAACAGTAATGAAGTGGAAGGATCCGGATTGAGGTTGGTGGAACAATACGGAAGTGGAGAAGAAGGAGATGAGAAAGAGAGAAAGCGAAGGATTTTGGAACTGGAAGCTTATCTGAAGCAGTTGGAGTTGTTGCAGGATCAAATTAAGACTAGAATAGAGGAGTTGCGAAACGAAGGTGAATGA 921 0.4875 MLSSLVSWILASSPSSSSSEEEDNFVDDGDHYENVGENEHFLRKAEELPSTSCAGDTKTTPVALATAGADGSYIPDTGTGSRKRRRISHSYPRRQHQRLWTKQEEIELLRGYLGYIKQNRWGTTSLQNDVTFFHDHIRPKLNTDFNKNQLVQKLRGLKRKHKTVLDRVNSGREVWHKSPQEEAIFDISQRIWGKNRDRESGQDPDADKNEVNSEEDGDESGHLNEENKDIKKLIEETMRSCLSPLDNSNEVEGSGLRLVEQYGSGEEGDEKERKRRILELEAYLKQLELLQDQIKTRIEELRNEGE 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2331 306 MobiDBLite consensus disorder prediction 195 226 - -
Lele13g2331 306 Coils Coil 280 306 - -
Lele13g2331 306 MobiDBLite consensus disorder prediction 244 272 - -
Lele13g2331 306 Pfam Protein of unknown function, DUF573 97 193 IPR007592 GO:0006355
Lele13g2331 306 PANTHER BNAANNG10740D PROTEIN-RELATED 16 299 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2331 Lele-ChrLele13 29182911 29183831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2331 226 302 GeBP Transcription Factor Family AT5G28040 27.451 2.50e-07 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Lele13g2331 DUF573 1.9e-22 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2331 13 29182911 29183831 Lele15g0084 15 496213 498678 hybridization
Lele13g2331 13 29182911 29183831 Lele16g0091 16 534007 534930 hybridization