Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2329 ATGGCTCAACCATCAGCTTTGGATCTTGTGTTTACTGTGAGGAGACGCCAACCAGAACTAGTTACTCCCGCTAAGCCCACCCCTCGTGAATTTAAGCTACTTTCCGACATAGATGACCAAGATGGTCTTCGATGTCTAATTCCAACGGTACACTTTTTTCCTTACGAGCAATCCATGCAAGGAAAGGACCCTGTTCAGCTTATCAGAAACGCACTTGCTCAAACCCTAGTCTTTTACTACCCACTCGCAGGTCGGCTTAGGGAACTCTCTGGCCGCAAACTTGTAGTAGATTGTAACGAGGAAGGCGTCGTCTTCGTGGAGGCTGATGCAGATGTCACTGTTCACCAGTTCGGTGACCCCATTCAACCTCCATTCCCATGCTTTGAAGAGCTCCTTTATAATGTTCCAGGCTCCGAAGGAATTCTTAATTGTCCCCTCTTAGTTGTTCAGGTTACCCGTCTCAAGTGTGGTGGTTTCATTTTCGCCTACTTCCTGAACCACACCATGTGTGATGGTCCTGGTATAGTTCAATTCTTAGGAGCCTTGGCGGAGATTGCCAGGGGTGCTACTGAGCCTTCAGTTACCCCAGTTTGGTGTAGAGAGCTACTAAAAGCAAGGAACCCACCTCGTATTACCTGCACCCATCGTGAGTACGTGGAAGTGGCTGATGATGCAGAAACAAAAAATATGACAGACGAAGCTATGGCCCACAGCTCTTTCTTCTTTGGACCCGACAAGATAAAGGCCATCCGTCGACTGTTTTCTCAATACCATGGTCAACACACCACGTTTGAGATGTTGACAGCATTCCTCTGGCATTGTCGCACCATATCATTAGAGCTAGAACCCGAAAAGGAGGTTCGCCTGATGGTCATTAGCAATGTGAGGGGCAAAACAAACCCTCCATTGTTGCCGCGTGGCTATTACGGTAATGGCTTTGTGTACCCCGCCGCTGTTACCGCCGCGAGGAAGCTTTCTAGGAATCCATTGGGGTATGCCTTGGAGCTGGTGAAAGCGGCGAAAGGTGAGGCAACGGCAGAGTATATACAATCCGTAGCAGATCTTATGGTGATCAGAGGACGGCCTTGCTTCACGCCGGTAAGGTCATGGATTGTGTCGAATTTGATACATTCCGGGCTTAGAGATGTAGATTTTGGATGGGGCAAGGCCATATTCGGTGGACCAGCAGGGGCCGGGGCCGGGTCGTTTCCTGGAGTGAGCTTTTTCATTGCATGTGACAATGCTAAAGGAGAAGAAGGTATTGTAGTACCAATATGCTTGCCGCACAGATCTATGGAGATTTTCGCCAGAGAGATAGATAACATGCTTAGCAACTACAGCAACTATGGTCAAGATTCTACAATGATCATGTCTTGCCTGTAG 1383 0.4845 MAQPSALDLVFTVRRRQPELVTPAKPTPREFKLLSDIDDQDGLRCLIPTVHFFPYEQSMQGKDPVQLIRNALAQTLVFYYPLAGRLRELSGRKLVVDCNEEGVVFVEADADVTVHQFGDPIQPPFPCFEELLYNVPGSEGILNCPLLVVQVTRLKCGGFIFAYFLNHTMCDGPGIVQFLGALAEIARGATEPSVTPVWCRELLKARNPPRITCTHREYVEVADDAETKNMTDEAMAHSSFFFGPDKIKAIRRLFSQYHGQHTTFEMLTAFLWHCRTISLELEPEKEVRLMVISNVRGKTNPPLLPRGYYGNGFVYPAAVTAARKLSRNPLGYALELVKAAKGEATAEYIQSVADLMVIRGRPCFTPVRSWIVSNLIHSGLRDVDFGWGKAIFGGPAGAGAGSFPGVSFFIACDNAKGEEGIVVPICLPHRSMEIFAREIDNMLSNYSNYGQDSTMIMSCL 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2329 460 Gene3D - 9 217 IPR023213 -
Lele13g2329 460 Pfam Transferase family 13 440 - -
Lele13g2329 460 Gene3D - 218 439 IPR023213 -
Lele13g2329 460 PANTHER ACYL TRANSFERASE 4 11 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2329 Lele-ChrLele13 29173283 29174770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2329 16 437 Monolignol Biosynthesis Gene Families AT5G48930 28.440 6.67e-43 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2329 13 29173283 29174770 Lele15g0086 15 505525 507008 hybridization
Lele13g2329 13 29173283 29174770 Lele16g0093 16 545473 547666 hybridization