Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2311 ATGGCTCGGAGTGACGAAGTTAACCTCAACGAGTCCAAGATGGTGGTGCCGCTAAATATGTGGGTTCTCATCTCCAATTTTAAGTTGGCTTACAATCTTCTCCGTCGTCCTGATGGTACTTTCAACCGGCACCTGGCGGAGTTTCTTGATCGTAAAGTTCCAGCCAATGCGAACCCTGTTGATGGGGTTTTCTCCTTTGATGTTATTGTTGACCGTGAAACCAATCTCCTCAGTCGAATTTATCGACCTGCTGAAGGAGAAGAGACTCGTGTGAATATTGTTGACCTTGAGAAGCCTGTAACCGCTGAGGTTCTACCTGTCATCCTATTCTTTCACGGTGGAAGCTTTGCACATTCCTCTGCCAATAGCGCTATATATGATACTCTATGTCGCCGACTGGTGGGCATTTGCAAGTCTGTTGTTGTCTCAGTCAACTATAGGCGTGCACCTGAAAACAGGTATCCTTGTGCATACGATGATGGGTGGACAGCTCTCAAATGGGTCAGTTCTAGGTCATGGCTTCAGAGTAGAAAGGACCAGAAAGTTCACATTTACCTGGTGGGGGATAGCTCCGGCGGGAACATCGTCCACCATGTTGCCATGAGAGCCGTGGAATCTGGAATTGAAGTATTGGGAAATATACTGCTCAACCCATTTTTTGGTGGGAAAGAAAGATCGGAGTCTGAAAAGCGTCTGGATGGAAAATATTTTGTTACAATCAAAGATCGGGACTGGTATTGGAGAGCTTTTCTGCCGGAAGGGGAAGATAGAGACCATCCGGCATGTAACCCATTTGGTCCCAAGGGCAAAAATCTTGAAGGGATTGGCTTTCCGAAGAGCCTTGTTGTGGTAGCCGGTTTGGATCTTATTCAGGACTGGCAGCTGGCTTACGCGAAAGGGCTTGAGAAAGCTGGGCAAGATGTGAAGTTGCTATTCCTGGAGCAGGCCACAATTGGGTTTTACTTGTTGCCAAATAATGAGCATTTCTCTACGGTCATGGACGAGATAAGAAATTTTGTGAGCTCTGACCGTTCGTAG 1038 0.4692 MARSDEVNLNESKMVVPLNMWVLISNFKLAYNLLRRPDGTFNRHLAEFLDRKVPANANPVDGVFSFDVIVDRETNLLSRIYRPAEGEETRVNIVDLEKPVTAEVLPVILFFHGGSFAHSSANSAIYDTLCRRLVGICKSVVVSVNYRRAPENRYPCAYDDGWTALKWVSSRSWLQSRKDQKVHIYLVGDSSGGNIVHHVAMRAVESGIEVLGNILLNPFFGGKERSESEKRLDGKYFVTIKDRDWYWRAFLPEGEDRDHPACNPFGPKGKNLEGIGFPKSLVVVAGLDLIQDWQLAYAKGLEKAGQDVKLLFLEQATIGFYLLPNNEHFSTVMDEIRNFVSSDRS 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2311 345 PANTHER ARYLACETAMIDE DEACETYLASE 43 315 - -
Lele13g2311 345 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Lele13g2311 345 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Lele13g2311 345 FunFam Gibberellin receptor GID1 1 342 - -
Lele13g2311 345 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Lele13g2311 345 SUPERFAMILY alpha/beta-Hydrolases 47 340 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2311 Lele-ChrLele13 29035429 29037290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2311 1 343 Carbohydrate Esterase AT3G05120 78.779 0.0 577
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2311 13 29035429 29037290 Lele13g2323 13 29112465 29121024 CCT
Lele13g2311 13 29035429 29037290 Lele14g2255 14 27453701 27461704 CCT
Lele13g2311 13 29035429 29037290 Lele15g0089 15 548889 556135 CCT
Lele13g2311 13 29035429 29037290 Lele16g0099 16 591726 601793 CCT
Lele13g2311 13 29035429 29037290 Lele15g0103 15 626140 627983 hybridization
Lele13g2311 13 29035429 29037290 Lele16g0112 16 688153 690003 hybridization