Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2309 ATGGATGACGCGGTTCATTTGAGGAAGCAGTTGGTTGATTACAGTGCCTCTTTGTTTCAGGAGGGTTTTCTAGATGATCAATTTACTCAGCTTCAGCAACTTCAAGATGAAAGCAACCCAGACTTTGTGGTTGAAGTGGTGACTCTCTTTTTTGAAGACGCAGAGAGGCTTCTTAATGAGCTGGAACAAGCGCTGTATGGGCACCCTTTCTTAATGATTGCAAATGCGGGCATTGGAGCACAGAGGGTTCAGAAAGTCTGCATTGCCTTCCGCAGCTACTGTGAGGAGCAGAATGTTGAAAGGTGTCTTAAAAGCTTGCAGCAAGTAAGAGAAGAGTATTGGGTGGTGAAGAACAAGTTTGAGACTCTGTTCAAGTTTTTACTTAATGGGGATGGGGATGCAGATGGAGCAACAACTTTTGGCCGCCGGGGGTTCGGTTCCCATGTAGAGATTGTTGCTGAAAGACCCTACTCAGAATCAGAGAGCATGAAACGATATGGAATTTTTCGTGGAGATCTCTGTCCCGAAAATACTGCTAAATCACCGTTCCTCAGCCACGAAACTGGGGAGAAGCTAATTACTGCCCTATCATCGGTCGAGAAGCCAGAGGAAGTGGAGCCAGGTGATATTGCAATTGGGCCGACTAGTGGTAGCCCAATGGATAAAGGAGTTGAAGAATGTAGGATGCTTAATGCCAAGGAAGAAGGTATGGACTTGGAATCTTTGATTCCAGAAACTCAATTTAATGAAGAAATTGAATAA 762 0.4475 MDDAVHLRKQLVDYSASLFQEGFLDDQFTQLQQLQDESNPDFVVEVVTLFFEDAERLLNELEQALYGHPFLMIANAGIGAQRVQKVCIAFRSYCEEQNVERCLKSLQQVREEYWVVKNKFETLFKFLLNGDGDADGATTFGRRGFGSHVEIVAERPYSESESMKRYGIFRGDLCPENTAKSPFLSHETGEKLITALSSVEKPEEVEPGDIAIGPTSGSPMDKGVEECRMLNAKEEGMDLESLIPETQFNEEIE 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2309 253 Gene3D HPT domain 1 129 IPR036641 GO:0000160
Lele13g2309 253 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 125 IPR036641 GO:0000160
Lele13g2309 253 FunFam Histidine-containing phosphotransfer protein 1 2 129 - -
Lele13g2309 253 MobiDBLite consensus disorder prediction 199 253 - -
Lele13g2309 253 MobiDBLite consensus disorder prediction 226 240 - -
Lele13g2309 253 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 5 127 IPR045871 GO:0000160|GO:0009927|GO:0043424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2309 Lele-ChrLele13 29022590 29027132 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2309 13 29022590 29027132 Lele13g2318 13 29094133 29098011 CCT
Lele13g2309 13 29022590 29027132 Lele14g2253 14 27443859 27448047 CCT
Lele13g2309 13 29022590 29027132 Lele15g0093 15 570962 574823 CCT
Lele13g2309 13 29022590 29027132 Lele13g2309 13 29022590 29027132 ECH
Lele13g2309 13 29022590 29027132 Lele15g0105 15 634251 635320 hybridization
Lele13g2309 13 29022590 29027132 Lele16g0114 16 698369 699478 hybridization