Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2298 ATGCAGATAATAAATGAAAGGGATTTCTTCCGTGTGAATGAATTACGTCCACCTTCAAACACTATTTCTCGGCACCGGCAATTCTTCCCTGCGAATGCCAGCTCTTGCCATATCACACTCCTCCCAATGGCTTTCCTTGAAGCCACTCCTGCTTCCTCACCACTTCCACTATCTACGTCATATCTCAACACCAGCACCATTGTCGCTCTCTGTGTTTTCTTCGCACTTCTCTGCGCTTGCATCGTTGTCGGTCACCTTCTCGAAGAGAACCGGTGGGCCAATGAATCCATCACTGCCCTCCTTCTGGGGCTGTGTTCTGGAGTGGTGGTCTTGCTGGTGACCAAGTTCAGTGACACCGAATTTTTCAACTTCAGCGAAGACTTGTTCTTTCTTTACTTGCTTCCTCCTATCATTTTTAATGCCGGTTTCCAAGTGAAGAAGAAGCAGTTCTTCAAGAATTTTACAACTATTCTGCTGTTTGGAGTCGTTGGAACTGTTATTTCATTCTGCTTCATATCATTTGGTGCCTTTTTTCTGCTCAGGAAGATAGGTCTAAGCTTGGAGGTGCAAGATTACCTAGCCATTGGCGCCATATTCTCAGCAACGGACTCAGTTTGTACGTTGCAGGTTCTCAGTCAAGATGAAACACCCTTCCTATACAGCGTTGTGTTTGGGGAGGGAGTTGTAAATGATGCAACCTCTATTGTACTTTATAATTCAGTCCGGTCCCTTGACTTCAGCAGCATCAGTGCTACTACAGCCCTAAATTTGTTGGGGACATTCCTTTACCTCTTCCTCACCAGCACCATCCTTGGTTTATTTGTTGGCCTTTTGAGTGCTTTTACTATTAAAACACTTTACTTTGGAAGGCATTCTACAGATCGTGAAGTTGCACTCATGATGCTTATGGCTTATTTATCGTACATGATTGCTGAGCTTTTGAATCTCAGTGGGATTTTGACAATTTTCTTTTGTGGCATTGTCATGTCACACTACACTTGGCACAACGTTACAGAAAGCTCAAGGATAACTACCAAGCATGCTTTTGCAACAATCTCATTCATAGCAGAAACTTTTATATTTGTATATGTTGGCATGGATGCTTTGGATCTTGAGAAATGGAAAACCAGCAACGCAAGTGTAGGGACTTCAATTGCTGTCAGTTCAACTTTCTTGGCGTTAGTGTTGATTGGTAGGGCAGCTTTTGTGTTTCCTATTTCAAACATTAAAAACTGCTTCAAGACACAAGAGAGTTCCAAAATCAAGTTCCGATCGCAGTTTATAATATGGTGGGCGGGCCTATTGAGAGGCGCAGTGACTATTGCCTTGTGTTATTACCAGTTTGAAAAGGAGAGTCAGTCAGTTCAAGAATATGCAGTGGTGATCACCTCCACCATAATCGTCGTATTATTCAGTACTGTGGTGTTTGGTTCCATAACGAAGCCCTTGATTCAGGCAGTGCAGCTGAGGCATTCAAAACCAGCGAATTCTGAATCCACAGAAAATGCGGAGGATTTTGGATTCTTACTCCTTGAAAATGCTGGTCCAAGTGAGCAGGGCAACACTCAGGCAGGCCGGAGGAGAAGCAGCCTAAGTTTACTGATAAGTCATCCGACGTCAACGGTTCACTACTTTTGGAGGAAATTTGACGATAAATATATGAGACCAATATTTGGTGGGAGGGTTGTTGTTCCAGTTGTTCCTGTTTCACCTTCTTCTGATTCTAACGGAGCGACGGACGCTCCTCCAGCTCCGGACAATTGA 1764 0.4382 MQIINERDFFRVNELRPPSNTISRHRQFFPANASSCHITLLPMAFLEATPASSPLPLSTSYLNTSTIVALCVFFALLCACIVVGHLLEENRWANESITALLLGLCSGVVVLLVTKFSDTEFFNFSEDLFFLYLLPPIIFNAGFQVKKKQFFKNFTTILLFGVVGTVISFCFISFGAFFLLRKIGLSLEVQDYLAIGAIFSATDSVCTLQVLSQDETPFLYSVVFGEGVVNDATSIVLYNSVRSLDFSSISATTALNLLGTFLYLFLTSTILGLFVGLLSAFTIKTLYFGRHSTDREVALMMLMAYLSYMIAELLNLSGILTIFFCGIVMSHYTWHNVTESSRITTKHAFATISFIAETFIFVYVGMDALDLEKWKTSNASVGTSIAVSSTFLALVLIGRAAFVFPISNIKNCFKTQESSKIKFRSQFIIWWAGLLRGAVTIALCYYQFEKESQSVQEYAVVITSTIIVVLFSTVVFGSITKPLIQAVQLRHSKPANSESTENAEDFGFLLLENAGPSEQGNTQAGRRRSSLSLLISHPTSTVHYFWRKFDDKYMRPIFGGRVVVPVVPVSPSSDSNGATDAPPAPDN 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2298 587 PANTHER SODIUM/HYDROGEN EXCHANGER 68 558 IPR018422 GO:0006812|GO:0015299|GO:0016020
Lele13g2298 587 Gene3D - 188 240 - -
Lele13g2298 587 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 68 502 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele13g2298 587 Pfam Sodium/hydrogen exchanger family 72 484 IPR006153 GO:0006812|GO:0015299|GO:0016020|GO:0055085
Lele13g2298 587 PRINTS Na+/H+ exchanger signature 196 206 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele13g2298 587 PRINTS Na+/H+ exchanger signature 142 156 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele13g2298 587 PRINTS Na+/H+ exchanger signature 157 165 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
Lele13g2298 587 PRINTS Na+/H+ exchanger signature 128 139 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2298 Lele-ChrLele13 28959309 28964542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2298 57 582 Antiporters AT3G05030 59.701 0.0 637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2298 13 28959309 28964542 Lele15g0116 15 699806 704761 hybridization