Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2293 ATGGAAGTCAATACTACAGTGGATTCCATCAAGCCTCATACCGGCATGCACCACCACTTACATCCACCAAATTACCATGACCATGATTCCCAGTTCTCCCCCGAAACCATTCTCATTATCATCGTCGCCGTGGCCTCGGGATTGGTGCTGCTGCTTACCATTTTCCTGATCATATTCATGCTTCGTCGGCTGAAATGCTCCCCCAAGAATTCAGCTCTGAATGATAACACAAACGGCACAGCACTTGATGACGCGAGTTGCAGGTTCATGGCTTCGGCCACAATGAACTTGGGTTCCAGTCCAGCTGTGAAGGGAGGGTGTCTGAGTGGGGGGAGTGTGAGCATGAGCAGGGCAGGAGGATGTAATAAAAAAGTAAGAGGAGTGCAAGTGTTCACGTACAGGGAGCTACAAGAGGCTACAGAAGGATTCGGCGAGGCAAATGCGATTGGAAGTGGAGGATCTGATTCCATTTACAGAGGAGTCTTAAGTGATGGCACTCTCGCCGCAATCAAGCTGCTGCGGAGGCAAGGTAGGCAGGGGGAGCGTGCCTTCCGAATTGAGGTGGATATGCTAAGCCGCTTGCGCTCTCCATATTTGGTGGAGTTACTTGGGTACAGTGCAGACCAGCAGCACAGATTACTGATATTCGAATTCATTCCCAATGGAACGCTGCATCAGCACCTGCACTCTGGTATGAATCAAGCTAAACCCTTGAATTGGTGGACCCGCTTGAGGATAGCCCTTGATTGTGCCAGAGCTCTTGAATTCCTCCACGAGCATGCGGTCCCGCCGGTGATCCATCGTGACTTCAATTGCCACAGCGTTCTACTGGATCACAACTTTCGAGCCAAGATCAACGCTCATATTTCCACGCCTGCGTTAGGGACCACTGGATATCTAGCTCCAGAGTATGCGTGTTCGGGAAAGCTTTCCACAAAGTCAGATGTGTACAGCTACGGGGTGGTTCTCTTGGAGTTGCTCACTGGACGTCTGCCAGTTGATATCAAGAGACCTCCTGGAGAACACGTTCTCGTCTCTTGGGCTCTTCCAAGGCTAACCAACAGAGAGAATCTGGTAGAAATGGTTGACCCAGCTCTGCGAGGACACTACTCCAAGAAGGATCTAATTCAGATAGGTGCAATTGCAGCCATGTGCGTACAGCCAGAAGCAGATTACAGGCCGCTGATGACAGATGTGGTACAGTCGCTAATACCACTTGTCAGGAACACGAGTGCAGGTCCATTTGGTTCCCCACAACTTCAGAGACAAACATCAAGTAGTCCACTCCATCATTAG 1296 0.5039 MEVNTTVDSIKPHTGMHHHLHPPNYHDHDSQFSPETILIIIVAVASGLVLLLTIFLIIFMLRRLKCSPKNSALNDNTNGTALDDASCRFMASATMNLGSSPAVKGGCLSGGSVSMSRAGGCNKKVRGVQVFTYRELQEATEGFGEANAIGSGGSDSIYRGVLSDGTLAAIKLLRRQGRQGERAFRIEVDMLSRLRSPYLVELLGYSADQQHRLLIFEFIPNGTLHQHLHSGMNQAKPLNWWTRLRIALDCARALEFLHEHAVPPVIHRDFNCHSVLLDHNFRAKINAHISTPALGTTGYLAPEYACSGKLSTKSDVYSYGVVLLELLTGRLPVDIKRPPGEHVLVSWALPRLTNRENLVEMVDPALRGHYSKKDLIQIGAIAAMCVQPEADYRPLMTDVVQSLIPLVRNTSAGPFGSPQLQRQTSSSPLHH 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2293 431 Pfam Protein tyrosine and serine/threonine kinase 147 403 IPR001245 GO:0004672|GO:0006468
Lele13g2293 431 MobiDBLite consensus disorder prediction 1 25 - -
Lele13g2293 431 Gene3D Phosphorylase Kinase; domain 1 115 218 - -
Lele13g2293 431 ProSiteProfiles Protein kinase domain profile. 143 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g2293 431 FunFam Receptor-like serine/threonine-protein kinase ALE2 219 416 - -
Lele13g2293 431 PANTHER OS07G0668900 PROTEIN 122 411 - -
Lele13g2293 431 SUPERFAMILY Protein kinase-like (PK-like) 126 403 IPR011009 -
Lele13g2293 431 Gene3D Transferase(Phosphotransferase) domain 1 219 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2293 Lele-ChrLele13 28924378 28926766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2293 119 409 Receptor kinase-like Gene Family AT3G58690 56.090 1.60e-124 365
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele13g2293 PK_Tyr_Ser-Thr 1.3e-28 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2293 13 28924378 28926766 Lele15g0120 15 733931 736316 hybridization
Lele13g2293 13 28924378 28926766 Lele16g0131 16 775056 777428 hybridization