Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2286 ATGGGAGCAGATCACAACAGAATGGAAGAGAATGAAGGGAGGGGGATGACCTCTGTATCCTCCGACTCGGAGCACTCCGCCAGCTGCCCCATCTGCTTGGGACCCATGCTTCAGGAATCCTACCTCGACAAATGTTTTCATAAGTTTTGCTTCAATTGCATTTCACGCTGGGCCAAGGTGGTTACTGGCAAGCTCCATTCTCCACCTTCTTCTGTAAAATGTCCTCTTTGCAAGACAGAAAATTTTTCGATAATTTATGGATTTGATGGAAGTTGTTTTCAACGGCAATATGTAAATGAGGATTTTGGGTATAGTTTTACCTTATCAAGAGCGCAGAGATATAGATTACAATGCTATTACACTGAACCAGGTATCTTACAGGACATATTCAATATACCACGGTATTGGAAGTCTCGTAAGTATCATCAGCCAAACTGTTGGATTCAAAGTTGGCTCAGGAGGGAAATTCAAGCCCTTATCCAGGAGGAAGACGTGGACATCATTGTGCATCATATTGTGGGAGTAATAAGTGCATCACTTTCATGGAGAGAGCCAAATCGTCGCGTTCTGGAAGCGGAAAAGAAACAGGAGGAGTTCAAGATCACAGTTTCAGAAGCGGCAATGCCCTTCTTAGCTTCAAGGACCGGCAGATTTGTGTACGAGGTGCAACTGTTTCTTGCTTCAGGATTGAATATCGAAGCTTATGATGCAGTTTACATACAGCGATTGGGTTGGAGTTCGCCCGTCATAAACGCACAGGCGTCTCAGAGTGAACTTATTGATCGCAATGCGGTGACTTCATACTTGTATATATTTGATGCAGACTCTGATGGAAATGAATAG 843 0.4377 MGADHNRMEENEGRGMTSVSSDSEHSASCPICLGPMLQESYLDKCFHKFCFNCISRWAKVVTGKLHSPPSSVKCPLCKTENFSIIYGFDGSCFQRQYVNEDFGYSFTLSRAQRYRLQCYYTEPGILQDIFNIPRYWKSRKYHQPNCWIQSWLRREIQALIQEEDVDIIVHHIVGVISASLSWREPNRRVLEAEKKQEEFKITVSEAAMPFLASRTGRFVYEVQLFLASGLNIEAYDAVYIQRLGWSSPVINAQASQSELIDRNAVTSYLYIFDADSDGNE 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2286 280 SUPERFAMILY RING/U-box 23 84 - -
Lele13g2286 280 ProSitePatterns Zinc finger RING-type signature. 45 54 IPR017907 -
Lele13g2286 280 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 89 IPR013083 -
Lele13g2286 280 SMART ring_2 29 77 IPR001841 -
Lele13g2286 280 MobiDBLite consensus disorder prediction 1 25 - -
Lele13g2286 280 ProSiteProfiles Zinc finger RING-type profile. 29 78 IPR001841 -
Lele13g2286 280 PANTHER RING/U-BOX SUPERFAMILY PROTEIN 17 238 - -
Lele13g2286 280 Pfam Zinc finger, C3HC4 type (RING finger) 29 77 IPR018957 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2286 Lele-ChrLele13 28892746 28894590 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2286 13 28892746 28894590 Lele15g0127 15 762391 768038 hybridization