Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2285 ATGGCAACACTCTCAGACTACGGAGCTTTCATGGAGAAATTCATTCTCCGACCAACTTCTTCATCCCAGGGTCTCCCGTTAAGTTCTCTTACTTTTGCAGTCAAAGAACTATTTGATGTGGAGGGGCATGTGACTGGATTCGGGAATCCTGACTGGGCAAGAACTCATCCGGTGGCTTCATCCACTGCTCCAGCTGTATCAGCTCTCCTGAATGCAGGTGCCACTTGTCTTGGTACAACTGTCATGGACGAAATGGCTTACAGTATAAATGGAGAGAATATACACTATGGCACACCCACGAATCCTTGTGCAGCTGATAGGGTGCCTGGGGGTTCTTCTAGCGGCTCTGCTGTTGCAGTTGGTGCAAAGCTTGTAGATTTCTCCTTAGGAACTGACACCGGAGGAAGTGTAAGAGTGCCTTCTTCGTATTGTGGGATTTTTGGGTTTCGTCCTTCGCACGGAGCTGTTTCAACATCAGGAGTTGTTCCCATGGCACAGAGTTTTGACACTGTGGGATGGTTTGCTAGGGATCCTGTGATTTTGAGCAGAGTCGGACGTGTGCTTCTGCAATTGCCTGAAGTAGCACCTGTCAAACCCACTCGCATTATTATTGCAGACGATTGTCTTCAGCTTTCAAGCATTCCACACAATCTAGTTGCGCAAACTCTCATTAAAGCAGTTGAGGAGTTATATGGAGATGATGTATTGAAGCATGAAATCTTGGGCGACTATGTAGAGGCCAGGGTTCCAACTCTAAGGCATTTCATGAGTAATAGTCAATCAGACCAAGGATATAACATTCCATCTCTGGCAGCTCTTTCAAGTGCCATGCGATTACTTCAGAGGTACGAATTCAAGAATAACCATGGTGAATGGGTTAGTACAACGAAACCTGACTTAGGTCCAGGAATATCAGAACGTGTATCAGAAGCCCTAAGGACAACAGGGGAAAACATTGATTTCTGTCGGTCAGTAAAAGAGGAAATGCGTGATGCTATTTCTGCGCTTCTTGGGGATTTCGGTGTGCTCGTTATTCCCACTGTTCCAGGGCCACCGCCAAAAGTAGGAACAAGTACGCCTGACCTGGAAATTTTTCGTGCAAAGGCTTTTGCCCTGTTGTCCATTGCGGGAGTATCGGGACTTTGCCAGGTGAACATACCGATGGGGATGCATGGAGACCTTCCCATATCAATTTCTTTGGTGACCACACACGGTGCAGATGGGTTCTTGCTCAATCTTGTTGAGCGTCTCTATGACCTCCTTAAGCAAGAGATCACACCATCTTTCCACTATGCTTATAACGTCTGA 1308 0.4671 MATLSDYGAFMEKFILRPTSSSQGLPLSSLTFAVKELFDVEGHVTGFGNPDWARTHPVASSTAPAVSALLNAGATCLGTTVMDEMAYSINGENIHYGTPTNPCAADRVPGGSSSGSAVAVGAKLVDFSLGTDTGGSVRVPSSYCGIFGFRPSHGAVSTSGVVPMAQSFDTVGWFARDPVILSRVGRVLLQLPEVAPVKPTRIIIADDCLQLSSIPHNLVAQTLIKAVEELYGDDVLKHEILGDYVEARVPTLRHFMSNSQSDQGYNIPSLAALSSAMRLLQRYEFKNNHGEWVSTTKPDLGPGISERVSEALRTTGENIDFCRSVKEEMRDAISALLGDFGVLVIPTVPGPPPKVGTSTPDLEIFRAKAFALLSIAGVSGLCQVNIPMGMHGDLPISISLVTTHGADGFLLNLVERLYDLLKQEITPSFHYAYNV 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2285 435 PANTHER AMIDASE 1 5 425 - -
Lele13g2285 435 SUPERFAMILY Amidase signature (AS) enzymes 23 422 IPR036928 -
Lele13g2285 435 Gene3D Amidase signature (AS) domain 15 419 IPR036928 -
Lele13g2285 435 Pfam Amidase 306 411 IPR023631 -
Lele13g2285 435 Pfam Amidase 22 177 IPR023631 -
Lele13g2285 435 ProSitePatterns Amidases signature. 110 141 IPR020556 -
Lele13g2285 435 FunFam Outer envelope protein 64, mitochondrial 14 421 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2285 Lele-ChrLele13 28889292 28892007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2285 1 417 Acyl Lipid Metabolism Gene Families AT1G08980 64.846 0.0 558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2285 13 28889292 28892007 Lele13g2295 13 28942694 28943922 CCT
Lele13g2285 13 28889292 28892007 Lele14g2225 14 27291161 27292380 CCT
Lele13g2285 13 28889292 28892007 Lele15g0118 15 718688 719917 CCT
Lele13g2285 13 28889292 28892007 Lele16g0129 16 759080 760324 CCT
Lele13g2285 13 28889292 28892007 Lele15g0128 15 768910 771646 hybridization
Lele13g2285 13 28889292 28892007 Lele16g0137 16 800766 803188 hybridization