Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2274 ATGGTTGCGAGAACCCCACCAAAGTCGAAGAAAATGTTAGCCCCGCTCGATCCTCTCCTCATCAGAGAAACATTAAACAAGATGGATCAGTGCATGGCTCGGCTTCAGGAACTTCAGTATACTGTGGCCGGTGGGACGAAGGTGGTGTCAGGGGTGAATCTCAGCCCTCGCAGTACCAGAGGCTATCTAAGAACCAGTCTTAGGTGCAAGCAAGAATCGCTCAGGATCACAAATGGCGCCCGTTCCAGATCTCCTAAGGGGAAGTTTCCGGCAAATACAGGAGGTGAATGGAAGCGAATGTCATTGCCGGCAATGCTTGTGGGTGAAACTCTTGGAGAAATTCTACAGGCAAGTCAATTTGCCAGAGATATTGTTTCAGCAGCGGCTAAGAAAACTGATACAGATGACCCGAAAACTCCGGTACCAGCACAACGGTCAAACCCGAAATTACAACACCCAGAGAACACCCAACTCAAAGCTAGAAGGAACAAGGAGAAGCAAATCAAGCTAGAATCAGCTCGATCCGAATCAGCGTCACCTTCACTTGGAAGGGCTCGTTCAAGAATCAATTTTAAGGTTTCTCCCCAGAAAGTTAGAGAATTTGATAAACAAAATAACAGGTATATGGCAAACAGGGTGTCTCCAAGGAACAGGCCTTGGGCTAAGAAGACTGTTCTATTCCCCAATCCTTTGTTCCTGTCTACGCCTTCTACACAGCAACACAGGTTTTGCAAGACAAGATCTCCGGTTATATCACGAAACAGAGGAACTCCACACAAGTTCTTGATTAAGTCCCCACCTTCTACTTCTAAATTCCAATCCAAGAACAAAAGCCCCCCTAAATTCCAAGTCAAGGCTAGGAGTCCACCATCCAGGGTCCATGGCCAGAACAAAAGCCCTCCATCCAAATTCCAAGTGAAGATTAAAAGCCCACCAGTTTTGTCTATTTCTTCACCCACCAGACCCCTCAGTCTCATGAAAAAGACCTCTCCCAAGAGATCTGCTGTATCCAAGTTGCGTCGATCTTTCTCTCCATCTAGGCTGGCGACCAGATTAGCTTCATTTTCTCCATTGAAGAGCAAGAGAAGTGCGAGCGTACAGCAAAGTGATGGGTTAGTGAGTGGACTGAAACAGCGTCCACCTTCAACAGTGCAATTCCCTGCTCGAAGAATTTGA 1176 0.4694 MVARTPPKSKKMLAPLDPLLIRETLNKMDQCMARLQELQYTVAGGTKVVSGVNLSPRSTRGYLRTSLRCKQESLRITNGARSRSPKGKFPANTGGEWKRMSLPAMLVGETLGEILQASQFARDIVSAAAKKTDTDDPKTPVPAQRSNPKLQHPENTQLKARRNKEKQIKLESARSESASPSLGRARSRINFKVSPQKVREFDKQNNRYMANRVSPRNRPWAKKTVLFPNPLFLSTPSTQQHRFCKTRSPVISRNRGTPHKFLIKSPPSTSKFQSKNKSPPKFQVKARSPPSRVHGQNKSPPSKFQVKIKSPPVLSISSPTRPLSLMKKTSPKRSAVSKLRRSFSPSRLATRLASFSPLKSKRSASVQQSDGLVSGLKQRPPSTVQFPARRI 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2274 391 MobiDBLite consensus disorder prediction 250 391 - -
Lele13g2274 391 MobiDBLite consensus disorder prediction 290 304 - -
Lele13g2274 391 MobiDBLite consensus disorder prediction 311 381 - -
Lele13g2274 391 MobiDBLite consensus disorder prediction 139 154 - -
Lele13g2274 391 MobiDBLite consensus disorder prediction 263 281 - -
Lele13g2274 391 MobiDBLite consensus disorder prediction 155 172 - -
Lele13g2274 391 PANTHER MICROTUBULE-BINDING PROTEIN TANGLED-RELATED 298 389 IPR044709 GO:0008017|GO:2000694
Lele13g2274 391 MobiDBLite consensus disorder prediction 129 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2274 Lele-ChrLele13 28841051 28842515 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2266 13 28776579 28779048 Lele13g2274 13 28841051 28842515 CCT
Lele14g2202 14 27120825 27123350 Lele13g2274 13 28841051 28842515 CCT
Lele15g0146 15 894153 896957 Lele13g2274 13 28841051 28842515 CCT
Lele16g0151 16 915661 918188 Lele13g2274 13 28841051 28842515 CCT
Lele13g2274 13 28841051 28842515 Lele13g2284 13 28887644 28888775 CCT
Lele13g2274 13 28841051 28842515 Lele14g2218 14 27237586 27238723 CCT
Lele13g2274 13 28841051 28842515 Lele15g0129 15 772158 773291 CCT
Lele13g2274 13 28841051 28842515 Lele16g0138 16 803681 804818 CCT
Lele13g2274 13 28841051 28842515 Lele13g2274 13 28841051 28842515 ECH
Lele13g2274 13 28841051 28842515 Lele15g0137 15 821579 823031 hybridization
Lele13g2274 13 28841051 28842515 Lele16g0144 16 841010 859880 hybridization