Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2273 ATGCAAATGCAAGATATTTTCGGATCAGTTCGCCGATCACTGGTGTTTCGTACCACGCCGGAGAACGAAGAAGCCTCAGTTGGAGGAACCCTAGTTGATAAGATCAATTCTTGCATCCGCAAGTCCAGAGTCTTCTCTAAACCTTCTCCGACGTCTCCGCCATTGCCACCCATCACAAAGGAATCTTCGCCGATGATCCGATGGCGCAAGGGTGAGTTGATCGGATGCGGTGCCTTTGGCCGAGTTTACATGGGCATGAATCTTGATTCTGGAGAGCTTCTAGCAGTAAAACAGGTTCTGATTGCGGCTAGTAGTGCGTCGAAGGAGAAGGCACAGGCTCACATAAAGGAACTTGAGGAAGAAGTTAAACTTCTTAAAGATCTTTCTCATCCCAATATTGTTGTGGATCCATATCATCACTTCTGGGGAAGTTTGGAGCTTTCCCTGAGGCTGCTCTTCTCCTTGCATATTGGTCTAAGACGTGCATTGCTCCAGGCTACCATTTCTGGTGCGAAGTCTATGAAGGGTACTCCATATTGGATGTCTCCTGAAGTTATTCTCCAGACTGGGCATAGCTTCTCTGCTGATATATGGAGCGTTGGCTGTACTGTGATTGAAATGGCCACCGGAAAACCTCCTTGGAGCCAGCAGTACCAAGAGGTTGCTGCTCTCTTCCACATAGGGACAACAAAGTCTCATCCACCAATACCGGATCATCTCTCTGTTGGAGCAAAAGATTTTCTGTTAAAATGTTTGCAGAAGGAACCAGTCTTAAGGCCATCAGCATCAGAACTGCTGCAGCATCCCTTTGTTGCTGGTGAACACATGGGTTCATTTCCTGGGCCATGTACAGCAATGGGAGAATTTGAGGCTTCTTCAGCATCTTGCGCTTCAAACTTTGAAACTCCCTCAACTGTACATCCTGAGGAAGAAGAAAATAAAGAGTATTGGGGAATGGACAATGATGGCGACATGTGTGAGATTGATGACAAAGATGAGTACTCTGAGGGGGCTGTTAAATTTATATCCTCGATGTCAGAAAACATTATGAGTTTCAACCCGATGTCTGATCCCTGTGATGATTGGAGTTGCAAATTTAATGCGAGTCCACAACTGGATCGTAGTGTTGTTAGTATTACCACTGATGAAATGTACATGCCTTCTGACCACCTGGAGGCTTCCCATGAGGAGCAGAAAGATTTTTCCTTTTCAGGCGAACCATCAGTGTCTGAGGAGGAGGATGAGCTCACGGAGTCAAAAATACAAGCTTTTTTGGATGAGAAGGCTCTAGGACTGAAAAAACTGCAGACACCTTTATATGAAGAGTTCTACAACAGTTTAAATACATCTTGCTCGCCCAATGCGGTTGAAGACTCAAATGACGAAACTACTCCAAAGTTCTTGAAATTACCTCCTAAAGGCAGGTCCCCGAATCGGGCACCGATTGGCACCCCATCAAAAGCAGCTGACCATACCGAAAGTCCTGCTGGAAGTACTGGCAGGTCCTCCCCAAATGTTGGGGATGCAACTGATCATAATTCACAGAACATACCATCACCGCCCCGCAATGAATGGAAAGGATTGCTAGTTGATTCCCAGCAGGAGCCTTCTAGCCCAAGAAATGATGCGTCAAGCTGGTATGGGGGGGAAAACATCATCACCAAAGGATCGAGCCTTAAATCGGCAGAGAGAGCGGACAAGATTTGCATCACCCAGCACATAAGGATTGTCAGATTGGTCACCCTTCCGCGTGGCACCCATATTAGCCGCTGGAGATTGCAAACACGAGTTTCACTGCAGGGTGTTCATATACCCGATTCGGTGGTTTTGCCGGTCGACACATTGTTCAATGTGGTGTCACCCAGCCTCATAAAGCTTCAATGCTATGTTCTTCCAAGTGTTGTGCTGTGTAAAGCATTAATATCCGGGTGTTGCTTGAATATCTTTCTTTTTTCCTTTTGGGTTGAGAAATGGTTGCAAGCAAGTCTTGAGTATGTGTGCCCCGATTGTATTATGAATTAA 2022 0.4609 MQMQDIFGSVRRSLVFRTTPENEEASVGGTLVDKINSCIRKSRVFSKPSPTSPPLPPITKESSPMIRWRKGELIGCGAFGRVYMGMNLDSGELLAVKQVLIAASSASKEKAQAHIKELEEEVKLLKDLSHPNIVVDPYHHFWGSLELSLRLLFSLHIGLRRALLQATISGAKSMKGTPYWMSPEVILQTGHSFSADIWSVGCTVIEMATGKPPWSQQYQEVAALFHIGTTKSHPPIPDHLSVGAKDFLLKCLQKEPVLRPSASELLQHPFVAGEHMGSFPGPCTAMGEFEASSASCASNFETPSTVHPEEEENKEYWGMDNDGDMCEIDDKDEYSEGAVKFISSMSENIMSFNPMSDPCDDWSCKFNASPQLDRSVVSITTDEMYMPSDHLEASHEEQKDFSFSGEPSVSEEEDELTESKIQAFLDEKALGLKKLQTPLYEEFYNSLNTSCSPNAVEDSNDETTPKFLKLPPKGRSPNRAPIGTPSKAADHTESPAGSTGRSSPNVGDATDHNSQNIPSPPRNEWKGLLVDSQQEPSSPRNDASSWYGGENIITKGSSLKSAERADKICITQHIRIVRLVTLPRGTHISRWRLQTRVSLQGVHIPDSVVLPVDTLFNVVSPSLIKLQCYVLPSVVLCKALISGCCLNIFLFSFWVEKWLQASLEYVCPDCIMN 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2273 673 Gene3D Transferase(Phosphotransferase) domain 1 146 278 - -
Lele13g2273 673 ProSiteProfiles Protein kinase domain profile. 1 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g2273 673 MobiDBLite consensus disorder prediction 391 417 - -
Lele13g2273 673 MobiDBLite consensus disorder prediction 491 521 - -
Lele13g2273 673 MobiDBLite consensus disorder prediction 451 526 - -
Lele13g2273 673 ProSitePatterns Protein kinases ATP-binding region signature. 74 97 IPR017441 GO:0005524
Lele13g2273 673 SUPERFAMILY Protein kinase-like (PK-like) 67 272 IPR011009 -
Lele13g2273 673 Pfam Protein kinase domain 171 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g2273 673 Pfam Protein kinase domain 69 134 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g2273 673 Coils Coil 101 128 - -
Lele13g2273 673 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 46 134 - -
Lele13g2273 673 Gene3D Phosphorylase Kinase; domain 1 59 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2273 Lele-ChrLele13 28836038 28840659 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2273 3 537 MAP Kinase Kinase Kinase AT1G09000 47.950 1.29e-157 466
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele13g2273 Pkinase 8.5e-23 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2273 13 28836038 28840659 Lele16g0145 16 860562 864848 hybridization