Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2269 ATGTCTCTGCCGGGTAATGCTGGTATGGTCGTCATTTCAATCTTAATGGCTTACCGCCCTTTCTCTGTTCTGCTCGTCAGACGCATCACGCATCTCTCTCTTTCCTTCAAACCTAACCCCCCTGCAACTACAAGCTCCTTCTACCTCTCTCAGCTTCTGAAGTCTAAGCCCTACTCAACTTCTCAAGACCCTGTCACTGACCCCAGGCCCACTAGTCTTTCTGCCCGTCTTAGCTTCGTCTTTGATCAAATTGACGCCATTGAGAAAGAACGGGACCAAAAGCACCAAACTCTTCAACGAATTCGAGCCTGGCGCGAGTCTAAGAAGACGCGATTGCCACCCAATGACACTAATGGACCAGAATCAGAAATAGAAGCTGCAGCTAATGTCAACCCCAACCCAACCGATACCGGTTTGGCTGAGTCGAAGTTCGAAGCGACAAGGGAGGAAGAGAAGCGGGGTGAATTTTCTAAGAAGGATGTGGAGATGGTGCACCCGTGGCCGGAATGGATCGAATTGATGGAGAGGTTGGTTCAGCAGAATTATTTTGATCACAGGAGGAGGGACGAGGATAAACTGGTTCAGGATTTGGGGTTCGATTGTGCCGTGGTGGCAGATGATGCGGGGATTGATTTCACCAAGGATATCAAGAGCGTGCAAACCGCCTGCCTCAATTTTGGGAAAGACCGTTTCGATATATTAAGGTCCTTGTCGAGGAAGGATATTCAAATTCTGGTTGGTTTTGGATGCCCGACTGCAGACAAAAAAGTGGTTTTCTCTGCTAAACTTCTAAGGAAGCATGTCCACCTCGATGAAGGAGATGTAAGTGGAAAACCTTTAGTTTGGTGTTTAACACACTATGTCTGTAGTTCCTGCAGTTTGAGAAACTCTTGTGAAAGGGCGTATCTGCTTACAAACAGAGAGGATGAGGCACGGACTATTGATGTCATGCGGGTCTTAATGGCGTTTGCCTTTGATCCTGTGAATGGATCGTCCACCATTAAGTCACTTCTAAAGCAAAAGTCTGTGAAAACTATAGTTCGTAAATTGCTTCATGAGGTTGTTAAGTTGAGTTCTGTTCCTATAGATCCAAATCTACCCCCTCCTGTCATCAAAAAGCCCCCGCCTAAAGTGAAGCAACCTCCTCCTCCTCCAAAGAAACGTGTTGGACGAGATGATGTTGAGATGAAAAAAGGAGACTGGCTTTGTCCAAAGTGTGATTTCATGAATTTTGCAAAGAATACTGTTTGCTTACAGTGCGATGCCAAACGCCCGAAAAGACAGCTGCTGCCAGGAGAATGGGAATGTCCTGAGTGCAACTTCTTGAATTACAGGAGGAACATGGTATGCTTTCATTGTGAGTGTAAACGCCCACCTGATGAATTTCTGGATAATAAAATTCAAGACAAGCAGCATACTTCCAAACAGAGGGTGGATAAGATGTCCAGCAAGCGAGAGGTTTCCAATGCTTGGAATTTTGATTTTGATGATGCTGAATCAGATGGTGCTGATGTTGCAGCTTTTGAGTATGCAGATGCTCATGCAATAGATGAAGATTTTCCTTCAGATACCCAGGCTCAGCATGGGAATTTTGGACGGTCGGAAGGTGAATTTGAGAAAACTGATAGAGTGCAAGGATCCCTTGATGGAGAATATTCTAATCCTAATCTTAATAGGCCGGGACTAGGGTTTGATGATTTCGAGGATGAAGATGATATAGATAGTTATGAGCTAGAGACACACAATAGTAGTGCTAGAGTGAAAGATTCCGAAGGCGATTTTTCTGAATTTGAGGACTCTTCAGATGAAATGCGGTCCGTTCGTTCTAATTTCAAGTCTGGTCGTTTTTCTAGTGCTGAGCAGAAAGGCAAAGACAGGGTTCCAACCAAGAAATTAAGCTTTTCTTCTGAGGAGGAAGATCTCACTTTTGATTCGGAAGAACAACGGGCCATTCATTCTAAATTTAAATCTAGCCGTGTTTCTGGTGCTGCAAGAAAAGGCAGAGGCAAAGGTCCAACCAAGAAATTAAGCTTTGGTTCTTATTCTGATGAAGAATTTGTAGGTGGCCTCTACTCTGATGAGGATGAGGATTTAAATGAGGCATATACTTCAAGACGAAATAATGGGAACAGGCATGCTTCAGGAAGGAGAGACTTCAATAGAGACAGGCGGCCTAAATCTAGCGGTTCACACCGAGCAAACTGGTTCAGTGATGACTTTGATGGACCACCACGGCAGTCTTATGGTAAAAGAAGCGAGCCTGAAGGAAATGGCCGTAAACGGCAGATGTTTGAAGGCAGCGCGCGAGGCACACGACACTTGAACAAATCTCGCAGAGAACAATCTGAAAAACCAGGAGGACGGTTTAACAAACGCGGTATGGATGAGAAGGATTTTGGTGAATTTAGAAATAGCAGACGGGTGATTGAACGATAG 2436 0.4487 MSLPGNAGMVVISILMAYRPFSVLLVRRITHLSLSFKPNPPATTSSFYLSQLLKSKPYSTSQDPVTDPRPTSLSARLSFVFDQIDAIEKERDQKHQTLQRIRAWRESKKTRLPPNDTNGPESEIEAAANVNPNPTDTGLAESKFEATREEEKRGEFSKKDVEMVHPWPEWIELMERLVQQNYFDHRRRDEDKLVQDLGFDCAVVADDAGIDFTKDIKSVQTACLNFGKDRFDILRSLSRKDIQILVGFGCPTADKKVVFSAKLLRKHVHLDEGDVSGKPLVWCLTHYVCSSCSLRNSCERAYLLTNREDEARTIDVMRVLMAFAFDPVNGSSTIKSLLKQKSVKTIVRKLLHEVVKLSSVPIDPNLPPPVIKKPPPKVKQPPPPPKKRVGRDDVEMKKGDWLCPKCDFMNFAKNTVCLQCDAKRPKRQLLPGEWECPECNFLNYRRNMVCFHCECKRPPDEFLDNKIQDKQHTSKQRVDKMSSKREVSNAWNFDFDDAESDGADVAAFEYADAHAIDEDFPSDTQAQHGNFGRSEGEFEKTDRVQGSLDGEYSNPNLNRPGLGFDDFEDEDDIDSYELETHNSSARVKDSEGDFSEFEDSSDEMRSVRSNFKSGRFSSAEQKGKDRVPTKKLSFSSEEEDLTFDSEEQRAIHSKFKSSRVSGAARKGRGKGPTKKLSFGSYSDEEFVGGLYSDEDEDLNEAYTSRRNNGNRHASGRRDFNRDRRPKSSGSHRANWFSDDFDGPPRQSYGKRSEPEGNGRKRQMFEGSARGTRHLNKSRREQSEKPGGRFNKRGMDEKDFGEFRNSRRVIER 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2269 811 ProSiteProfiles Zinc finger RanBP2 type profile. 430 459 IPR001876 -
Lele13g2269 811 MobiDBLite consensus disorder prediction 711 729 - -
Lele13g2269 811 MobiDBLite consensus disorder prediction 113 139 - -
Lele13g2269 811 PANTHER ZINC FINGER PROTEIN 60 539 - -
Lele13g2269 811 MobiDBLite consensus disorder prediction 520 811 - -
Lele13g2269 811 ProSiteProfiles Zinc finger RanBP2 type profile. 397 426 IPR001876 -
Lele13g2269 811 MobiDBLite consensus disorder prediction 105 139 - -
Lele13g2269 811 Gene3D - 389 427 - -
Lele13g2269 811 Gene3D - 428 459 - -
Lele13g2269 811 SMART zf_4 399 423 IPR001876 -
Lele13g2269 811 SMART zf_4 432 456 IPR001876 -
Lele13g2269 811 Pfam Zn-finger in Ran binding protein and others 431 458 IPR001876 -
Lele13g2269 811 Pfam Zn-finger in Ran binding protein and others 397 425 IPR001876 -
Lele13g2269 811 MobiDBLite consensus disorder prediction 744 811 - -
Lele13g2269 811 SUPERFAMILY Ran binding protein zinc finger-like 390 426 IPR036443 -
Lele13g2269 811 ProSitePatterns Zinc finger RanBP2-type signature. 401 420 IPR001876 -
Lele13g2269 811 MobiDBLite consensus disorder prediction 618 638 - -
Lele13g2269 811 ProSitePatterns Zinc finger RanBP2-type signature. 434 453 IPR001876 -
Lele13g2269 811 FunFam Putative zinc finger, RanBP2-type 389 427 - -
Lele13g2269 811 MobiDBLite consensus disorder prediction 577 609 - -
Lele13g2269 811 MobiDBLite consensus disorder prediction 366 393 - -
Lele13g2269 811 MobiDBLite consensus disorder prediction 366 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2269 Lele-ChrLele13 28808927 28813325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2269 21 711 EF-hand Containing Proteins AT1G55040 51.676 0.0 607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2269 13 28808927 28813325 Lele13g2269 13 28808927 28813325 ECH
Lele13g2269 13 28808927 28813325 Lele15g0144 15 860301 869580 hybridization
Lele13g2269 13 28808927 28813325 Lele16g0149 16 882058 903584 hybridization