Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2268 ATGGGTAGGTTCTGTCATCTCGTCATTGTTTTTTTTTGTTTAGAATTTTCTGCTTATCTGTTAATTCGAACTGACTATACTGTATCACAAGGTACCGGTTTTGTTTTTATTTTTCCTTTGGTGTGTGGTGGCGCCCTCCTTCCTGTTTGGCCATGCTTTCTAGATTTGATTTATTCTGACCTGGTAAATAAAGGATTGATGGCACCGACAAGGAAATCAAGAAGTGTGAATAAACGGTGTTCAGGTTTAAATGAGGCCTCTCCTGATAAGGATGGGGCTAATTCAAATAAAAATAAGCATCGGAAGAAAAAGTTGTCTGACAAATTAGGATCTCAATGGAGCAAGGAGGAACTAGAGCGTTTTTATGAAGCATACAGGAAGCATGGGAAAGATTGGAAGAAAGTATCTACTGCTGTACGGAACAGATCCACTGAAATGGTGGAAGCTCTTTATAATATGAATAGGGCGTATTTATCTCTTCCAGAGGGAACAGCCTCTGTTGTGGGTCTCATAGCAATGATGACAGATCATTATAATGTGCTGGAAGGGAGTGATAGTGATAAGGAGAGCAGTGATGCTCCCGAATCTCAAAAACCTGTGAAACGGAAGCGTGGGAAAGTTCAGCTTAGTTTTTCTAAAGATTCTGTTCAAAGTCATTCATTTGCTTCTAATGATGGTTGCCTCTCTTTATTGAAGAAAAGACACTTTGATGGTAATTACTTCTGCAGTTTCTCAAAAGATCCTGTTTGTAGCCAACCTCGTGCAGTTGGAAAACGAACACCTCGCATACCAGTTTCCCACTCTCATAGAAAATTTGATCGGGAAAATTTTGTTTCACCAAGTAAAAGAACCCTGAAGTCAGAGAGTAATGCCAATGATGATGAGGTTGCTCATGTTGCAGCACTGGCTTTAACTGAGGCTGCTCAAAGAGGAGGCTCTCCTCATATTTCTCAAACTCAATACAGAAAAGCAGAGCAGAAATCCTCTCCTGTTCATAGCTGGGAAAGAATGTCAAAGACAGCTCGTGCCAAGTTTCATGACGCTTCTGTAGATGAAGAGTGCTTGGAAGGTAGTGTGGAAAGCAGGGAGGCTGAAAATGGAGAATATGCCAGAGATACTAGTCCATTGATGGACATGGAAGGGGTTGGCACTGTTGAAGTATTTCGCAAGGGGAAGAAAATTTACAGAAAGAGAGAGAGATATGTTCGAAACTATCAGCTTGATGATGGTGGGGAAGCATGTAGTGGCACTGAAGAAGAACTTTATTTTAATTCTTTGAAGGAAAAGGTTGATAGTGAGGTTACTAATGCCAAACCGCAGCAATTCTCTCCTAAAGGTCAGAGAAAACGAAGCAAAAAACTTTTCTTTGGAGATGAAAGTTCTGCCTTGGATGCTTTACAAACTTTGGCTGATCTGTCTTTAATGATGCCTGTGTCTACAATGGATTCTGAGTCATCAGTCCAGTTGAAGGAAGAAAGAATGACTGTTGATAAAGATGAGAAGTCTGCTTTGGTTGAAACTACATTTAAGAGCCAAAACAGAGACAAACTTAAACTCCCAGGTCCAAAGCAAAAGGTTCTTCATGCAGTTCCTGGAATTGAGGGTTCAACCTCGAGAAAATCTAAACTTGGGCAGGAGTTAGAAAATGAAACAAATGCTTCAGCTGAATCAAAAGAGCATATAACTCCTGATAGAACATGGAAAAGAAAGCGCAAGTCTGCGGTGTCAAAGGCCGTATCTGATGAAGAGAATAAACCGATGATTAAAGGAAAACAGAGTGTTCAGGTTTTTGCTCTCCCAAAACAAGTGAAACCAGTCAGATCATCTGAGAGCTCCTTGTGCAGTGATCCAAAAGATTTAACAGTATCAACTGCAGAAATTCCACTAGCAAGTGAAGTTAGTTTACCAAATAAAAGAAGTAGACGTAAGATGAGTATGCAGAAGGCATTCAATATGAAAGAGAAATCTTCTGAGAACATATTGAAAAAACAACCTAGTAAGTACTCTTCCGGCCTTCAAGACAGGGCTTCATATTTAAAGGAAGAGCTTTCTGGTTGCTTGTCGTCGTACATGGTTCGTAGGGGGTGTACTTTTGAGTGGTTTTATAGTGCAATTGATTATCCATGGTTTGCCAAAAGGGAATTCATGGAGTACTTAAACCATGTTGGACTAGGGAATATTCCAAGGCTAACTCGTGTTGAGTGGAGCGTTATAAAAAGTTCCCTGGGGAAACCTCGCAGGTTTTCTGAGCACTTTCTTCGTGAAGAAAGACAAAAACTTGAACAGTATAGGGAATCTGTGAGGAAACATTACACTGAACTCCGCACTGGTATCAGGGATGGACTCCCAACAGATTTAGCAAGACCTTTATTTGTTGGACAACGAGTAATTGCTATTCACCCCAAATCAAGAGAGGTTCATGATGGTAGTGTGCTTACTGTTGACCACGACAAATGCAGGGTTCAGTTTGACCGTCCTGAATTAGGGGTTGAATTTGTCATGGATATTGATTGCATGCCTATGAATCCCGTGGATAATATGCCAGAAGCTCTGAGAAGACAGATTGGTGCTGGCAAAGTTTCTTATATGGGCAAACAGCTACAGATAAATGAAATTTCTGATTTTGAGGGTGGGGTGACATGTGGTTCAGGTGGACCCCTGGAGAAGCTACCTGCCCCTTCAAGTACTTTATTAAAGCCAGGAAAGGAGGATGTTAATCATGATGTTGCCCAAGCAAAGGTTGGAACGATTGACAATGTTGATACACTACAAGAAGCATATGCTCAGCCCTGTCCATTCACACATAATCAAGCTAGAGAAGCTGATATACGTGCCCTTTCTCAACTGACTCGTGCTCTAGATAAAAAGGAAAAATTGTTAATGGAGCTTAGAAATGCAAATAATGACATGTTGGAAAACCAAAACGACGTAGACTACTTTAAAGATTCAAAGTCTTTCAAGAAGCATTACGCCACGGTACTTGTACAGCTAAAGGAAGCCAGTGGGCAGGTTTCTTCTGCTCTGCTTAATTTGAGGCAACGAAATACTTACACAGAAAATTCTCTATCACCATGGGTGAATGCCCCAGCTAGTTTCAATGTCCAAGATGATCCTCCATGTGCATTAGATAGTTCTCTAACGCAAGAGTTAGCATCAAGTGTCATTGAAATTATCAAAGGATCCAGGCTAAGAGCACATGCCATGGTAGATGCTGCAATTCAGACGTTGTCTTCGACAAAAGAAGGTGAAGATGTTTTCTTGAGGATAGGGCAAGCATTGGATTCCATTGATTATCAGCAGTTGGCCTCCAACTCTAAAGTGAATGGCAGTTTTGGTCACCATGATCAGTCAATTTGCTGCGCATCAGAAACTCTACATAGTGATACATCAGGCCCGAAATTGATGAATGATTCCCACAAGGTTGATATTCAAATTCCTTCCGAGCTCATTACATCCTGTGTCGCTACTTTGATCATGATTCAGACTTGTACTGAACGGCAATACCCACCAGCTGATGTTGCTCAGATATTAGATTCAGCCGTCAACAGCCTGCATCCTTGCTGCCCTCAAAACCTTCCTATATACAGGGAAATTAAGATGTGCATGGGACGAATTAAGACCCAGATTTTAGCTCTCATCCCGACTTGA 3648 0.4115 MGRFCHLVIVFFCLEFSAYLLIRTDYTVSQGTGFVFIFPLVCGGALLPVWPCFLDLIYSDLVNKGLMAPTRKSRSVNKRCSGLNEASPDKDGANSNKNKHRKKKLSDKLGSQWSKEELERFYEAYRKHGKDWKKVSTAVRNRSTEMVEALYNMNRAYLSLPEGTASVVGLIAMMTDHYNVLEGSDSDKESSDAPESQKPVKRKRGKVQLSFSKDSVQSHSFASNDGCLSLLKKRHFDGNYFCSFSKDPVCSQPRAVGKRTPRIPVSHSHRKFDRENFVSPSKRTLKSESNANDDEVAHVAALALTEAAQRGGSPHISQTQYRKAEQKSSPVHSWERMSKTARAKFHDASVDEECLEGSVESREAENGEYARDTSPLMDMEGVGTVEVFRKGKKIYRKRERYVRNYQLDDGGEACSGTEEELYFNSLKEKVDSEVTNAKPQQFSPKGQRKRSKKLFFGDESSALDALQTLADLSLMMPVSTMDSESSVQLKEERMTVDKDEKSALVETTFKSQNRDKLKLPGPKQKVLHAVPGIEGSTSRKSKLGQELENETNASAESKEHITPDRTWKRKRKSAVSKAVSDEENKPMIKGKQSVQVFALPKQVKPVRSSESSLCSDPKDLTVSTAEIPLASEVSLPNKRSRRKMSMQKAFNMKEKSSENILKKQPSKYSSGLQDRASYLKEELSGCLSSYMVRRGCTFEWFYSAIDYPWFAKREFMEYLNHVGLGNIPRLTRVEWSVIKSSLGKPRRFSEHFLREERQKLEQYRESVRKHYTELRTGIRDGLPTDLARPLFVGQRVIAIHPKSREVHDGSVLTVDHDKCRVQFDRPELGVEFVMDIDCMPMNPVDNMPEALRRQIGAGKVSYMGKQLQINEISDFEGGVTCGSGGPLEKLPAPSSTLLKPGKEDVNHDVAQAKVGTIDNVDTLQEAYAQPCPFTHNQAREADIRALSQLTRALDKKEKLLMELRNANNDMLENQNDVDYFKDSKSFKKHYATVLVQLKEASGQVSSALLNLRQRNTYTENSLSPWVNAPASFNVQDDPPCALDSSLTQELASSVIEIIKGSRLRAHAMVDAAIQTLSSTKEGEDVFLRIGQALDSIDYQQLASNSKVNGSFGHHDQSICCASETLHSDTSGPKLMNDSHKVDIQIPSELITSCVATLIMIQTCTERQYPPADVAQILDSAVNSLHPCCPQNLPIYREIKMCMGRIKTQILALIPT 1215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2268 1215 ProSiteProfiles Myb-like domain profile. 111 152 IPR001005 -
Lele13g2268 1215 Pfam Myb-like DNA-binding domain 111 148 IPR001005 -
Lele13g2268 1215 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 105 147 IPR017930 -
Lele13g2268 1215 MobiDBLite consensus disorder prediction 182 202 - -
Lele13g2268 1215 CDD SANT 113 147 IPR001005 -
Lele13g2268 1215 FunFam Protein ALWAYS EARLY 3 isoform A 69 165 - -
Lele13g2268 1215 MobiDBLite consensus disorder prediction 77 108 - -
Lele13g2268 1215 MobiDBLite consensus disorder prediction 541 584 - -
Lele13g2268 1215 Coils Coil 946 976 - -
Lele13g2268 1215 SMART sant 109 157 IPR001005 -
Lele13g2268 1215 SMART DIRP_2 701 802 IPR033471 -
Lele13g2268 1215 MobiDBLite consensus disorder prediction 182 207 - -
Lele13g2268 1215 MobiDBLite consensus disorder prediction 532 584 - -
Lele13g2268 1215 ProSiteProfiles SANT domain profile. 108 145 IPR017884 -
Lele13g2268 1215 MobiDBLite consensus disorder prediction 311 327 - -
Lele13g2268 1215 SUPERFAMILY Homeodomain-like 107 156 IPR009057 -
Lele13g2268 1215 PANTHER LIN-9 67 1215 IPR010561 GO:0006351|GO:0017053
Lele13g2268 1215 Gene3D - 59 165 - -
Lele13g2268 1215 MobiDBLite consensus disorder prediction 308 339 - -
Lele13g2268 1215 Pfam DIRP 700 801 IPR033471 -
Lele13g2268 1215 Coils Coil 753 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2268 Lele-ChrLele13 28796378 28806198 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele13g2268 DIRP 7.4e-32 No_clan