Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2258 ATGACCTTTACTTGCACGAAAATGGCTTCTGCTTCTGAGGCGTTAAGCTCCATCTTCTTGCTCTTGATGTTCCTATATTTTCAAAGAACCCACATTTTGTCTGTGGATGCTCTGTTTCACCCGGTAGGAAACTTCCATGTCCATGTCCTATCAGCGAACGGACAAGAAAATGACAACCAGGTCAAGGAAATCTCTGGACAAGATGAGAATGATGGCAAGGGGCTTCTGATAGTGGAAAAGTTCAGAGCTTTGCTCGGACTCTACAGTTTCCAAACCAGAAGGCTATCAAATGGCGATTCTGAGTTTCTCTCTCCATCACCTTCTCCTTCACCTAATACTGAACTTGAGCCTCCATCCCCATCTCCTCTTCCTTTACCTCATGTGTTTGCTCATCCCTTTAATTCACGACATCGTCCCCGTTTTAATCCATCAGCTCGCAAGTTCCAACATAAAGATAAAGGCAGAGCTCAAGCAATGCTAGTAGGTCTTCTTGCTTCTGTGGGGGTTGCTACAGTGCTCTGTGCTCTTGGGCTTATCTGTTTTTTCAGAAAATGCAGAAAGCATGCAAGGAAACCCAAAAGGACAATGCCACTCTGTAGCAAGAATGGAGAAAGCGGAGGTTCTTATGAAAACTCGTCAAGTCAGCTGGGTTTGAACTCTGCCATAGATCTATTTTATCTGAATGCTTTAGGCGACGATATAGAGCAACACATGTGCAGCTTGAAAAATATTTCTGAAACAGTAAATACAAGCTCGGATCACAGCTCCATCACTAAATGTGCAATTTATGAGAAGATGGAATTAAATGAAGAAGTGATCAGTTCAGGATATGATAATGCTAGCAGTTCTTCCACAAAGGAAATTCTATCTATTCATGAGGACGCTGAATCGGGGAAAGATGATGGTAGAGATCAAGTTATTACCATGGAACGCCATTCATCAGAGACTGAAAGTTTTCATTCCTTCGCCGATTCCCAATCGTCAAATGTCAGACTTTCCGATGCGTCAGCGGGCAGTGTGCCTGAGACAGTGTCCCCGTCGCCTCTAGCATCTCAGTCTAATTCTATCAGTTCGCCGATTCCATTCACAAAGGAAATTCCTCATTCCCCCCAAACTTCAACTTCAACTTCAAAGATAGAATCTCCTCAACCACCATGCATTACAAAGCAGGAACAGCAAGGGATTGAAACTTGTTCACAACGTGCCCAAGCCACCACGCCTCCGCCTCCGCCTCCGCCGCCCCCACCTCCAACTCTCCAAATGCCCTTGTTTTCTTTGCATTCTCTTACTTCTTCATCAAGAATTCCCTCCGACTCTCTACTTTCTTCATCATCTCCAAGAAACTTGGATTCTAGCTCAGCATTGAATCGAAGCGGAGTAAATGAGCCGCCTCGTCCTCCTCAACATCCCCCTGCAAGATCGCCACCTAACGTTCCCCCACCTCCATGTCCACCACCGCCCTTCAAAGCTTATAACAACAATGTGAAAACTCCACGTCCTCCGCCATCTCAGCTTCCCCACTTTACGCCTCTGGGAAAAGATGGAGCCCCGCTACCAAAACTTAAACCGCTTCACTGGGACAAAGTAAGAGCTGCCCCGGATCGCACGATGGTTTGGGACAAAATACGAACAAGCTCATTTGAGTTTGATGAGGAAATGATCGAGTCACTTTTTGGCTACAATTTGCAAAATTCAATGAAGAAAGACGAGATCAAGAGCAAAAGTCCTTCTCCAACCAAACACCTACTCGAGCCGAAGAGGCTGCAGAACATTACAATTCTCTCAAAAGCTCTGAATGTGACAGCTGAACAAGTATGTGAAAACCTAATACAAGGTAAGGGCCTCGCTTTACAACAGCTAGAGGCACTGGGGAAGATGGTGCCCACCAAGGAAGAAGAGGATAAGCTCTCTAATTATAGAGGAGACGTCAATGATTTGGGATCCGCGGAAAAGTTTGTAAGAGCAATGCTGAGCATACCCTTTGCCTTTCAACGTGTTGAAGCAATGCTTTACAGAGAAACCTTTGAGGATGAGATTGTCCACCTGAGGAACTCTTTTTCAATGCTCGAGGAGGCGTGCAAGGAACTAAGATCAAGTAGGCTCTTCTTGAAATTACTTGAAGCTGTGCTGAAAACAGGAAACCGTATGAATGTTGGGACAATAAGAGGAGGTGCCAGAGCATTCAAGCTCGATGCCCTTCTCAAGCTAGCTGATGTTAAGGGAACTGACGGGAAAACTACGTTACTCCATTTTGTTGTTCAGGAGATTGTTCGATCAGAAGGAATCAGAGTTTCGAATAGCATTATGGGGAAAATCAGCCAGAAAAGTAAGAACAGAATGGAAGAAGAGAAGGAGGATGGTTACAGAAGAATGGGATTAGAACTTGTTTCTGGTTTGAGTACTGAGTTATACAACGTAAAGAAGACAGCGACAATCGACTTGGACGTTCTTGCCAGCTCTGTCTCAAACCTCAAAGACGGAATGGCCAAGCTGCAATATCTGGTGCAGGAGTTACGTACGGATGAAAAAAGTGAGAACTTTGTGAATTCGATGAAGGCTTCCCTAAATTATGCAGAGAGAAACGTAAGGGAGCTGCAGGGAGATGAAGATAGAGTACTATCTCGTGTGAAAGAAATCGCAGAGTATTTTCATGGGGATGTGAGCAAAGAAGACGCAAATCCACTTCGGATATTTGTGATTGTAAGAGACTTTATGGGCATGTTGGATAATGTATGTAAAGAACTCAGAAGGTCCCAAGCTCCTCGCACCCCAAATCCTCTCGCGCCATTCAGGTAG 2796 0.4485 MTFTCTKMASASEALSSIFLLLMFLYFQRTHILSVDALFHPVGNFHVHVLSANGQENDNQVKEISGQDENDGKGLLIVEKFRALLGLYSFQTRRLSNGDSEFLSPSPSPSPNTELEPPSPSPLPLPHVFAHPFNSRHRPRFNPSARKFQHKDKGRAQAMLVGLLASVGVATVLCALGLICFFRKCRKHARKPKRTMPLCSKNGESGGSYENSSSQLGLNSAIDLFYLNALGDDIEQHMCSLKNISETVNTSSDHSSITKCAIYEKMELNEEVISSGYDNASSSSTKEILSIHEDAESGKDDGRDQVITMERHSSETESFHSFADSQSSNVRLSDASAGSVPETVSPSPLASQSNSISSPIPFTKEIPHSPQTSTSTSKIESPQPPCITKQEQQGIETCSQRAQATTPPPPPPPPPPPTLQMPLFSLHSLTSSSRIPSDSLLSSSSPRNLDSSSALNRSGVNEPPRPPQHPPARSPPNVPPPPCPPPPFKAYNNNVKTPRPPPSQLPHFTPLGKDGAPLPKLKPLHWDKVRAAPDRTMVWDKIRTSSFEFDEEMIESLFGYNLQNSMKKDEIKSKSPSPTKHLLEPKRLQNITILSKALNVTAEQVCENLIQGKGLALQQLEALGKMVPTKEEEDKLSNYRGDVNDLGSAEKFVRAMLSIPFAFQRVEAMLYRETFEDEIVHLRNSFSMLEEACKELRSSRLFLKLLEAVLKTGNRMNVGTIRGGARAFKLDALLKLADVKGTDGKTTLLHFVVQEIVRSEGIRVSNSIMGKISQKSKNRMEEEKEDGYRRMGLELVSGLSTELYNVKKTATIDLDVLASSVSNLKDGMAKLQYLVQELRTDEKSENFVNSMKASLNYAERNVRELQGDEDRVLSRVKEIAEYFHGDVSKEDANPLRIFVIVRDFMGMLDNVCKELRRSQAPRTPNPLAPFR 931
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2258 931 PANTHER FORMIN-RELATED 439 923 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele13g2258 931 MobiDBLite consensus disorder prediction 110 127 - -
Lele13g2258 931 SMART it6_source 511 923 IPR015425 -
Lele13g2258 931 MobiDBLite consensus disorder prediction 98 127 - -
Lele13g2258 931 SUPERFAMILY Formin homology 2 domain (FH2 domain) 479 919 - -
Lele13g2258 931 MobiDBLite consensus disorder prediction 423 459 - -
Lele13g2258 931 MobiDBLite consensus disorder prediction 277 516 - -
Lele13g2258 931 Gene3D Formin, FH2 domain 535 923 IPR042201 -
Lele13g2258 931 MobiDBLite consensus disorder prediction 404 421 - -
Lele13g2258 931 Pfam Formin Homology 2 Domain 515 908 IPR015425 -
Lele13g2258 931 MobiDBLite consensus disorder prediction 289 318 - -
Lele13g2258 931 ProSiteProfiles Formin homology-2 (FH2) domain profile. 511 931 IPR015425 -
Lele13g2258 931 Coils Coil 848 868 - -
Lele13g2258 931 MobiDBLite consensus disorder prediction 463 491 - -
Lele13g2258 931 MobiDBLite consensus disorder prediction 319 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2258 Lele-ChrLele13 28738731 28742075 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2258 496 931 FH2 protein (formin) Gene Family AT3G05470 73.864 0.0 657
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2258 13 28738731 28742075 Lele13g2267 13 28790602 28795113 CCT
Lele13g2258 13 28738731 28742075 Lele14g2203 14 27134674 27137374 CCT
Lele13g2258 13 28738731 28742075 Lele15g0145 15 870825 875340 CCT
Lele13g2258 13 28738731 28742075 Lele13g2258 13 28738731 28742075 ECH
Lele13g2258 13 28738731 28742075 Lele15g0152 15 928517 931836 hybridization
Lele13g2258 13 28738731 28742075 Lele16g0158 16 945378 948800 hybridization