Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2256 ATGTTATCCAAAAAGAATCAATGCGAAGAGAATCAGACACTGATCAGCAAAAGAAGAAAAAAGTGTGGTGAGGCATCAAATGCTAAGTTGATAATGACAGTTTCAGACAGCCCTTCCCCCGAGAGGAATTCTAGTGAAGTTCGAATGGCTGCAACAGAGACAAAAGTGGAAGTGAAAGAAGCGGAAGAACAGATAGAGCCCCTTATGTGCAAGGCAAGGCATTGTGTTTACAACATAAACATCGATTTGAGGAAACAGAAAGTCATGGTAATGGGGAACGTAGACAGCAAGACACTGATAAAGAAGCTAAAAAAATCAGGGAAACATGCCGAGTTGTGGCCTGAAAAGTCTGATTCAAAAAAGAAAAAGCAAGGGAAATCTGAGAACAAAGAGAAACAGAGCGACCCTAAGAGCAGAGAAGATAGCAGCCAAGTCTGCGACGAAGATGAAAGGGAAGGAGGTATTAAAGTTGTAGTCCAAGACCCGACGAAAAATGGCGAAGCATGTGGATGTGCAACTGGAAAAAGCGGTGTGCAGTTTCAAGAACAGAGGCCAGAGCGGAAGCAAGTTGTGACTATATCGGCCGGTAACCAGCCGCCACTGCAGGGGGGCAACGAAAATGAAGCGGGGAACGAGAGAAGTGGCGGTGGAAGTAAAAAGAAGAAAAAGAAGGGGCGAAAAAGTAATAACAGTGGAGCCGAAGGCGGTGAACGTTCAGGGGATGCTCCGGCGAACCATTCACAGGTTCAAGTACTGGAAGCAGTTTCAATTCCAAGCCTATCCAATCAGACTCTTCCAGGTCATCACATTGGCCATCAATACTCACCACATTCCTACTACGGACCACCTGCGCATACGTTGTACCATCACAAAGCACATCCCAACAACAGCTACAGCACAGCTTATTATAACTCCAAAGGATCGTGTTCGTGCGCCCATGCACATCCAAACGAAGAGACGGGAATGGAGCCTCCGCCGGACGATTCATACACATCGCAGCCGTCGGATTCTTTCGCGTTCCTGAGCGACGAGAATCCAAATGGATGCGCAGTAATTTCTGTGAATGTACAAGAGTGTGGATTTGGAAAACGGTGCATGGATGTGTCAGGACGAAAAGTAGAAAAGAATCGTAGAAAGCCTGCTCCAACCCTAATTTCGATCATCCTTCCCTCGAGTCCCAGAGGTCGGCTAATGGAGTTCGCGTTGAGTGATAACGCCCTGAAAACCTTTGCTCGCTGCATCACTTGTCTCGCCCGCATCGGAAATGAGCTTTCCATTCAAGCCTCTTCCTCTCAGCTTGTTTTCCACACTCTCAATTCATCGCGATCAGCATATCAATCCGTTACCTTCAAACCAGGCTTCTTTGATGTCTATACAGTATCCGGAAACATGGCGCAATTAAGTGTACTTTTGAAGGCTATCTGTTCAGTTTTCAGGACACCGATAACAAATATTGATCGTTTGACTGTGAGACTGCTTGGTCCTGACGCTTCTAAAGTGCAGTGGATCTTGGAATGCTGTAGTGGTATGAGGAAAACCTATTGGATTACTTGCAATAACGAATCTGACATACAGCACTTATCCCTTGATAGGCAAAAATTCCCAAGTAACTTTGTTGTGAGGCCTCAAATTCTCAACAGGTTACTAGCTAATTTTCAGTCATCTCTCCAAGAGATTACCATCATCGCAACAGAACCTTCCTCATTACCTTCTGATGCTGCAAGTGTAATTGGTGGAAAGGCTGTTGAACTTCGAAGTTATTTGGACCCAACCAAGGATAATGACTCATTGCTACACACCCAGTTGTGGATTGATCCTAAAGAGGAATTTTTACAGTATATTCACAATGGAGACCCTGTTGATGTGACTTTCAGTGTAAAAGAACTGAAGGCATTTCTTTCATTCTGTGAAGGCTGTGAAGTTGACATCCATTTACATTTTGAGAAAGCTGGAGAGCCCGTTCTAATGGCACCTAAATTTGGTTTGGAAGATGGCCCTGATTCAAATTTTGATGTCACACTTGTATTGGCAACCATGTTGATATCTCAGCTACACGAAGTTGCCTCAGAAGTTCCACAGGCATCTACAAGAATTCATGCTCAAACTGAAAAGGGTGGATCTCATGTGCGGCAAGAGAATTGCAAAACAAATGCATCCGAGCTTCCATCTGATCACACCCGTATATGGTCTGACCTATCAGGAAGTGCAACTAAAAATACAAGTGGTATAGAAGAAAGACAGGTGCAAAGAGAAATTTTTTTGAATGATAACGAACAGAGGGAAATTCAAAGGATTGTTACCATGCAAATTTCAGGAGTAGCATCGGTTGCAAGAAATACTTTTGTCGAGAACAATTCCTGCCATCCAACTGAGGAAGATCGTATTCAAGAACCTCAAGATGGGATACAAGTAAATGGGCAAGGCTTTTCTCAGCATCACCCTAGCAACTGGGTAGAATCTGAAGAGGATGATGATGACGATGGGGATGAGAACGAGCAGTATGTTCAGTCAACACCACCATACTATGAGGAATCATAA 2538 0.4417 MLSKKNQCEENQTLISKRRKKCGEASNAKLIMTVSDSPSPERNSSEVRMAATETKVEVKEAEEQIEPLMCKARHCVYNINIDLRKQKVMVMGNVDSKTLIKKLKKSGKHAELWPEKSDSKKKKQGKSENKEKQSDPKSREDSSQVCDEDEREGGIKVVVQDPTKNGEACGCATGKSGVQFQEQRPERKQVVTISAGNQPPLQGGNENEAGNERSGGGSKKKKKKGRKSNNSGAEGGERSGDAPANHSQVQVLEAVSIPSLSNQTLPGHHIGHQYSPHSYYGPPAHTLYHHKAHPNNSYSTAYYNSKGSCSCAHAHPNEETGMEPPPDDSYTSQPSDSFAFLSDENPNGCAVISVNVQECGFGKRCMDVSGRKVEKNRRKPAPTLISIILPSSPRGRLMEFALSDNALKTFARCITCLARIGNELSIQASSSQLVFHTLNSSRSAYQSVTFKPGFFDVYTVSGNMAQLSVLLKAICSVFRTPITNIDRLTVRLLGPDASKVQWILECCSGMRKTYWITCNNESDIQHLSLDRQKFPSNFVVRPQILNRLLANFQSSLQEITIIATEPSSLPSDAASVIGGKAVELRSYLDPTKDNDSLLHTQLWIDPKEEFLQYIHNGDPVDVTFSVKELKAFLSFCEGCEVDIHLHFEKAGEPVLMAPKFGLEDGPDSNFDVTLVLATMLISQLHEVASEVPQASTRIHAQTEKGGSHVRQENCKTNASELPSDHTRIWSDLSGSATKNTSGIEERQVQREIFLNDNEQREIQRIVTMQISGVASVARNTFVENNSCHPTEEDRIQEPQDGIQVNGQGFSQHHPSNWVESEEDDDDDGDENEQYVQSTPPYYEES 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2256 845 MobiDBLite consensus disorder prediction 103 159 - -
Lele13g2256 845 PANTHER DNA REPAIR PROTEIN RAD9 398 830 IPR007268 GO:0000077|GO:0030896
Lele13g2256 845 CDD HMA 76 111 IPR006121 GO:0046872
Lele13g2256 845 MobiDBLite consensus disorder prediction 178 212 - -
Lele13g2256 845 Gene3D - 399 679 - -
Lele13g2256 845 Gene3D - 12 114 - -
Lele13g2256 845 Pfam Rad9 410 679 IPR007268 GO:0000077|GO:0030896
Lele13g2256 845 MobiDBLite consensus disorder prediction 103 157 - -
Lele13g2256 845 FunFam cell cycle checkpoint control protein RAD9A 399 679 - -
Lele13g2256 845 SUPERFAMILY DNA clamp 407 516 - -
Lele13g2256 845 MobiDBLite consensus disorder prediction 802 845 - -
Lele13g2256 845 MobiDBLite consensus disorder prediction 178 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2256 Lele-ChrLele13 28719895 28727446 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2256 13 28719895 28727446 Lele13g2266 13 28776579 28779048 CCT
Lele13g2256 13 28719895 28727446 Lele14g2202 14 27120825 27123350 CCT
Lele13g2256 13 28719895 28727446 Lele15g0146 15 894153 896957 CCT
Lele13g2256 13 28719895 28727446 Lele16g0151 16 915661 918188 CCT
Lele13g2256 13 28719895 28727446 Lele15g0154 15 944941 951906 hybridization
Lele13g2256 13 28719895 28727446 Lele16g0163 16 968398 972103 hybridization