Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2250 ATGGACGAAAGGATAAGAAAGAAAGCGATCAGTTATCTCAAGGTGCAGGGGTTGAGCCCTCAGGCACGGCCTCTTCAAAATCAGAAGGCGCCAAAAGAAGTAAGGGCATGGTGGGAACTAACGGCTTGTGATCACGTGATTCTTCCCGGCCCACACGAACAAATCCAGCTTCTGACTGATAGATCTGCTATAAAACCTGTCAGCACTATGGGCCTTCTCGACCAACTGTGGGATGATACCGTCGCCGGCCCTCAGCCGGAGAACGGTCTCGGAAAGCTCCGAAAGCACAAGACCTTCAGTGCCCGAGCTACAGGGTCCGGCAAGGAATCATACGAGCGAAGCGCGAGATCTTACGAGGAGGAATCGGCGGAGGAGGCGTTGAGAGTGACGCGTCGCATCATGATCGTAAAACCACCGGGGTACCAGAGTGGATCGCCTCCAGTTTCACCTGCAGGTTCTACTCCGCCGGTGTCTCCGTTTTCGGGAGCAAAAGAATCGTTCCGGTTTCGTAGAAGGTCGACCTCAGATGCGTACGAGAAGCCGATCCAGAACAGATCATCAAGCTCTTCTTCTCCTTTCGATGTGTGA 588 0.5357 MDERIRKKAISYLKVQGLSPQARPLQNQKAPKEVRAWWELTACDHVILPGPHEQIQLLTDRSAIKPVSTMGLLDQLWDDTVAGPQPENGLGKLRKHKTFSARATGSGKESYERSARSYEEESAEEALRVTRRIMIVKPPGYQSGSPPVSPAGSTPPVSPFSGAKESFRFRRRSTSDAYEKPIQNRSSSSSSPFDV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2250 195 MobiDBLite consensus disorder prediction 98 122 - -
Lele13g2250 195 Pfam Dormancy/auxin associated protein 76 155 IPR008406 -
Lele13g2250 195 PANTHER DORMANCY-ASSOCIATED PROTEIN 1 70 192 IPR008406 -
Lele13g2250 195 MobiDBLite consensus disorder prediction 179 195 - -
Lele13g2250 195 MobiDBLite consensus disorder prediction 137 195 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2250 Lele-ChrLele13 28677737 28680628 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2250 13 28677737 28680628 Lele05g0203 05 1095429 1096886 CCT
Lele13g2250 13 28677737 28680628 Lele06g0011 06 66882 68312 CCT
Lele13g2250 13 28677737 28680628 Lele07g0206 07 1104465 1105912 CCT
Lele13g2250 13 28677737 28680628 Lele08g0012 08 62693 64118 CCT
Lele13g2250 13 28677737 28680628 Lele15g0162 15 999038 1000200 hybridization
Lele13g2250 13 28677737 28680628 Lele16g0171 16 1017505 1018761 hybridization