Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2245 ATGGGGCAGCTATCCTCTATGTTCAATGGACTGGCAAGGTCAATTGCAACAAAGAAAGGAAGTAGTTCTGGGAGATGTGGTGGCAGAGAAGCAGCGGAAGCCATGGCAAAGGAAGCTAAAAGAAGGGACTTGATGCTGTGTTCCTCTGGTATTGTTAAGGTGGATGGTTCAAGCAACTTTGTCTCTGTTTTCTCCAGAAGAGGCCAGAAAGGAACCAACCAGGATTGCTGCTTAGTGTGGGAGGAATTTGGATGTCAAGAGGACTTGATGTTTTGCGGGATATTCGATGGGCATGGACCATGGGGTCACTTTGTGGCCAAGGGAGTGAGAGAGGCAATGCCCCCTTCTTTGCTTTGTAATTGGCAGGAAACACTTGCCCAAACTCCTTCGCCTGATCCTCATGTTGATGTCGATATAGAGGCTGAGAAAAAGCAACAAATATTTGATATATGGAAGCATTCCTATTTGAAGACTTGTGCCGCCATTGATCGCGAACTCGAGCAGCATCGCAAGATCAATTCCTTCTACAGCGGAACCACTGCCCTGTCCATTGTTCGGCAGGGAGAAGTCATAGTGATAGCAAATGTTGGGGACTCTCGTGCTGTGCTGGGCACAACATCAGAAGATGGAAGCTTGGTACCAGTTCAGCTCACAGTTGATTTCAAGCCCAATTTACCTGAGGAAGCAGAGAGAATAACAGAGTGTCAGGGGCGAGTGTTCTGCTTGCAGGACGAGCCAGGGGTTCACAGGGTGTGGCTGCCACACGAAGAATCACCAGGACTGGCCATGTCTAGAGCATTCGGCGACCACTGTGTGAAGGAGTATGGTCTAATTTCTGTGCCCGAGGTCACCCACAGGAATCTAACCCCTAGAGATCAATTCGTGGTGCTAGCAACCGATGGGGTGTGGGATGTAATATCCAACGAAGAAGCAGTAGATATCGTGAATTCAACGGCAGACAGAGCCAAGTCAGCTAAACGTTTGGTGGAGTGCGCAGTGCACGCATGGAAACGCAAGAGGCGAGGCATTGCCATCGATGACATTTCAGCCATCTGTCTCTTTTTTCACTCCTCCCCTTCATCCCTCTAG 1089 0.4931 MGQLSSMFNGLARSIATKKGSSSGRCGGREAAEAMAKEAKRRDLMLCSSGIVKVDGSSNFVSVFSRRGQKGTNQDCCLVWEEFGCQEDLMFCGIFDGHGPWGHFVAKGVREAMPPSLLCNWQETLAQTPSPDPHVDVDIEAEKKQQIFDIWKHSYLKTCAAIDRELEQHRKINSFYSGTTALSIVRQGEVIVIANVGDSRAVLGTTSEDGSLVPVQLTVDFKPNLPEEAERITECQGRVFCLQDEPGVHRVWLPHEESPGLAMSRAFGDHCVKEYGLISVPEVTHRNLTPRDQFVVLATDGVWDVISNEEAVDIVNSTADRAKSAKRLVECAVHAWKRKRRGIAIDDISAICLFFHSSPSSL 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2245 362 Gene3D - 50 357 IPR036457 -
Lele13g2245 362 ProSiteProfiles PPM-type phosphatase domain profile. 60 355 IPR001932 -
Lele13g2245 362 FunFam Probable protein phosphatase 2C 34 51 357 - -
Lele13g2245 362 SMART PP2C_4 48 353 IPR001932 -
Lele13g2245 362 SUPERFAMILY PP2C-like 58 357 IPR036457 -
Lele13g2245 362 CDD PP2Cc 59 355 IPR001932 -
Lele13g2245 362 PANTHER PROTEIN PHOSPHATASE 42 353 - -
Lele13g2245 362 Pfam Protein phosphatase 2C 135 329 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2245 Lele-ChrLele13 28652474 28654271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2245 1 356 PP2C-type Phosphatase Gene Family AT3G05640 68.994 0.0 528