Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2239 ATGCACAATGCTGGGAAGGTTTACAGACACTTAAGAAAGCGCGTAGCTTTAGAAAGGATTGAGACCTGGAGGCAATGGCAGGCCAGTTCTCATCCACAACAGGGAATACATGGGACACATGTTGCTGAAGCGACTAGTTTCCCATCATGTAGACTGTTCTCTGGGAAGGAACTACAGAGATGCATTGAAGAGTGTTCGGGTTCCGTCGAGTTCTACGGCCTCCACGGTTCCGGCAGAGCTGGTGCCCCGGTGATTGAATTGGTCAGCACGTCGCTTCTGAATCAGAATCGTTCTTATGCTGCGCTTAGTACCGAGGACCCCAGTAATTCAAGAATCATCGAGATCAAATCCGATCTACGCAGAATGATCAGTTTTGGGCCATGTCGTGGCACATCGCTTCTACATCGAAGCTGGACTTTTCTTCCTGAAGTGTTGGAAGCTAATGTGCAATGTTCACGCACAAAAATGGCAGAGTTGGCCAAAGCTCATGCAAAGGCTTTAATGCCGTCATTTGGAGATGGTAAGGAGGAACAACGAGCCATTGAAACTTTAACTCATGAGATAACTGACTTGATAAAGAGATCAGAGAGGCGACTGCAGAGACTTTCTGCTACCGGGCCTTCTGAGGATTCCAATGTGAGGAAGAACGTGCAGCGTTCTCTTGCTACTGACCTTCAGAACCTCTCTGTAGAGCTCCGCAAGAAACAATCAAATTATTTGAAGCGACTTAGACAGCAAAAAATTTGA 747 0.4699 MHNAGKVYRHLRKRVALERIETWRQWQASSHPQQGIHGTHVAEATSFPSCRLFSGKELQRCIEECSGSVEFYGLHGSGRAGAPVIELVSTSLLNQNRSYAALSTEDPSNSRIIEIKSDLRRMISFGPCRGTSLLHRSWTFLPEVLEANVQCSRTKMAELAKAHAKALMPSFGDGKEEQRAIETLTHEITDLIKRSERRLQRLSATGPSEDSNVRKNVQRSLATDLQNLSVELRKKQSNYLKRLRQQKI 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2239 248 Gene3D - 137 248 - -
Lele13g2239 248 SUPERFAMILY t-snare proteins 143 246 IPR010989 GO:0016020|GO:0016192
Lele13g2239 248 SMART SynN_4 129 244 IPR006011 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2239 Lele-ChrLele13 28622568 28625808 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2239 70 247 SNARE and Associated Proteins AT3G05710 62.921 2.99e-66 207
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2239 13 28622568 28625808 Lele15g0175 15 1051771 1055445 hybridization
Lele13g2239 13 28622568 28625808 Lele16g0186 16 1066205 1069278 hybridization