Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2238 ATGGCTTCTGTCGTCGTTAGCCACCCACCGCTCGCTAAAGCTTCGTCAACCTCGTCCACAGCATTGCCCATCGCTCGACGGACTGTTCGTCGGATGAATCGGGTGACATCAGTAAGTGCTGCACTGATTGCAAAACCACTACAACCCCACTCTGGAGAGGAGGGCCAGCTGGGCCCAAGACGCTATGCAACGCTTGTGGGATTAGATACAGGAAGAGAAGGGCTTCTGCGCCATTATCATTTACATGATATAATGAAATTGAATGTTACCGACCTTTGGTTTCCTGGGTCTGTTGTAAATTTGGTTCTGAACTTCTCCCTTTACGTTTCTATGAAGATAGGAACCATGGTTTTTTCATTATTGCAAGTACCCAGATGCAGAATACACAGCATAGCTAATTATTGGGATGAAACCTTCCACAGTTCAAGTAAGATTTATGGTAATAATTCTAATGACAGGCTACTCTGTTCTAGAATTTATGGTCAGGATGGAGGGCACAGTAAGAAGTGGAGTAGTAGAAGACCTGTAACTACAAAAACAGAAGGAAAAGGAAATAAACAAACCACCTGTAGCACCAGATCAAGAATTATCAAGCCTGAAATTTCAAGCGAAACGGTGTTAGCAAGTAGTGCATTGAATGTAAATAAAACACAGCTAGTTCATTTCCAGGATATTCAATACTGCGACATACAGCAGGAGATTGCTCAGAACAAAGACTTATCTAGCAAAGTCACTGTTATTGTTTTTGATACTGAGACTACTGGGCTTAGCAGACTACGAGGACGGATCATTGAGATTGCACTCCGAGATCTTCAAGGTGGTGATAATAGCACCTTCCAAACTCTTGTAAATCCTGAATGCGATGTTACTAATTCCTACATTCATGGCATTACCACTAAGATGGTTAACAGTCCTGATGTTCCAAGGATGGAGGAACTGATTCCCATCTTATTACAGTATATTCAAAGCCGTCAGAAGCCTGGTGGCCATGTATTATGGGTTGGTCACAATGCTCGCTGTTTTGATGTACCCTTCATCATTAATGAATTTAGACGTTGTTCTGTAGAAATTCCTCCTGACTGGCTATTTGCAGATACCCTTCCTTTGGCACGAAAAAAACTTTCTTCAACAACACTAGAGGCCCTTCGTGAGCTCTATAGTATTCAAGTGGATGGAACTGCTCATAGGGCCATGGTAGATGTGAATACATTGTCAAGGATACTTCCAAGATTGACCTTTGATCTCAAGTTGACCTTATCTGGCCTTGTCCAAAGATCATTTACCGAATCAGATTTGGTCAACTCTAAGAAAAAGAAGAACTCAGGCTGA 1329 0.4221 MASVVVSHPPLAKASSTSSTALPIARRTVRRMNRVTSVSAALIAKPLQPHSGEEGQLGPRRYATLVGLDTGREGLLRHYHLHDIMKLNVTDLWFPGSVVNLVLNFSLYVSMKIGTMVFSLLQVPRCRIHSIANYWDETFHSSSKIYGNNSNDRLLCSRIYGQDGGHSKKWSSRRPVTTKTEGKGNKQTTCSTRSRIIKPEISSETVLASSALNVNKTQLVHFQDIQYCDIQQEIAQNKDLSSKVTVIVFDTETTGLSRLRGRIIEIALRDLQGGDNSTFQTLVNPECDVTNSYIHGITTKMVNSPDVPRMEELIPILLQYIQSRQKPGGHVLWVGHNARCFDVPFIINEFRRCSVEIPPDWLFADTLPLARKKLSSTTLEALRELYSIQVDGTAHRAMVDVNTLSRILPRLTFDLKLTLSGLVQRSFTESDLVNSKKKKNSG 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2238 442 SMART exoiiiendus 245 417 IPR013520 -
Lele13g2238 442 Gene3D - 244 418 IPR036397 GO:0003676
Lele13g2238 442 Pfam Exonuclease 247 406 IPR013520 -
Lele13g2238 442 PANTHER THREE PRIME REPAIR EXONUCLEASE 1, 2 169 436 IPR040393 GO:0008408
Lele13g2238 442 CDD DEDDh 247 408 - -
Lele13g2238 442 SUPERFAMILY Ribonuclease H-like 245 411 IPR012337 -
Lele13g2238 442 FunFam Exonuclease DPD1 chloroplastic/mitochondrial 244 421 - -
Lele13g2238 442 MobiDBLite consensus disorder prediction 166 187 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2238 Lele-ChrLele13 28609309 28615981 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2238 13 28609309 28615981 Lele15g0178 15 1067021 1070391 hybridization
Lele13g2238 13 28609309 28615981 Lele16g0189 16 1078713 1083866 hybridization