Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2235 ATGGATCCGGAGGGAGGTTCCAACGACGGATCTAGCTACTACTCCATCCTTGGTATTCCTAGGGACGCCTCCTTCTCCGATGTCCGCACTGCCTATCGGAATCTCGCTTTGAAGTGGCACCCGGACAGATGGGCTGGAAACATCGCAATAATTGGAGAAGCCAAACGGCGATTCCAGCAAATTCAAGAAGCTTACTCAGTTCTTTCCGATCAGTCCAAAAGGTCAATGTACGACGCGGGATTCTACGATCCTTTAAAAGAAGAAGACGAAGAATTCTGCGATTTCATGAACGAGATGATCTCGATGATGAACAATGTGAAGGACGAGGAAAACAGTTTGGAAGATCTACGGAGGATGTTCGTAGAAATGGTTGGTGGAGATGAGATGAGCTTCGAGTCGAAGGATGATCAAACGTGCGGCAAGAGAGGTCGTGTCAGTGCACCAAGGGGCAACGCAGCTAAGCGCAGCAACTCTCGCCGCTAG 483 0.4969 MDPEGGSNDGSSYYSILGIPRDASFSDVRTAYRNLALKWHPDRWAGNIAIIGEAKRRFQQIQEAYSVLSDQSKRSMYDAGFYDPLKEEDEEFCDFMNEMISMMNNVKDEENSLEDLRRMFVEMVGGDEMSFESKDDQTCGKRGRVSAPRGNAAKRSNSRR 160
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2235 160 Gene3D DnaJ domain 3 103 IPR036869 -
Lele13g2235 160 MobiDBLite consensus disorder prediction 129 160 - -
Lele13g2235 160 Pfam DnaJ domain 13 78 IPR001623 -
Lele13g2235 160 PANTHER PUTATIVE, EXPRESSED-RELATED 8 136 - -
Lele13g2235 160 CDD DnaJ 13 70 IPR001623 -
Lele13g2235 160 ProSitePatterns Nt-dnaJ domain signature. 58 77 IPR018253 -
Lele13g2235 160 ProSiteProfiles dnaJ domain profile. 12 81 IPR001623 -
Lele13g2235 160 SMART dnaj_3 11 73 IPR001623 -
Lele13g2235 160 SUPERFAMILY Chaperone J-domain 9 81 IPR036869 -
Lele13g2235 160 Coils Coil 99 119 - -
Lele13g2235 160 PRINTS DnaJ domain signature 32 47 IPR001623 -
Lele13g2235 160 PRINTS DnaJ domain signature 14 32 IPR001623 -
Lele13g2235 160 PRINTS DnaJ domain signature 53 73 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2235 Lele-ChrLele13 28597868 28599152 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2235 13 79 C2H2 Transcription Factor Family AT1G74250 39.706 1.37e-11 59.7