Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2220 ATGAAGGCATCCGTTCAACATCTTGCTTCACGTGTATCTTCTCGAGTCATGGCTGAAGCTGCAAAAAATATAACACCGCCAAGTTCAGCTTATCAGTTTGAGGTCTCATGGAGAGGATTTTCAGATGATCCTGCCCTGCAGGCTCGTCTGTTAAAGTGCGTGGCATCCTTTTTCTTTGAAGACACAGCTCTGGCTGTCAGTTACATAGAGCACTTGACCAAGGTTTCAAGATTTGACATGCTCATTATGTGTCTTACATCAACAGATAAGCATGATCTGCGCAAGATCTGGGAGGAAGTGTTCTGCAGCGAGGCAACTTCAATGGAGTATGCAGAGATTCTTGACAACCTCCGCTCCAAATACTGCATTGAAGATTGA 378 0.4471 MKASVQHLASRVSSRVMAEAAKNITPPSSAYQFEVSWRGFSDDPALQARLLKCVASFFFEDTALAVSYIEHLTKVSRFDMLIMCLTSTDKHDLRKIWEEVFCSEATSMEYAEILDNLRSKYCIED 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2220 125 Pfam Potential Monad-binding region of RPAP3 49 90 IPR025986 -
Lele13g2220 125 PANTHER OS05G0129900 PROTEIN 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2220 Lele-ChrLele13 28532522 28533430 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2220 13 28532522 28533430 Lele15g0193 15 1141275 1145389 hybridization
Lele13g2220 13 28532522 28533430 Lele16g0203 16 1153178 1157442 hybridization