Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2211 ATGGCACCTTTGGAATCAATTGTAGAACCTATTAGTTCAGAGACGTGCCCGGAAAGCAATCGGAGAAAGCGTAGGAAAATCGGGCACGATGTCCGCAACGATCAGAATTCGCTCGCTCCGATTCCGTGGAGATCTAAGACAGAGCAGCGAATCTATTCCTCCAAGCTCGTCGAAGCTCTCCGCCGCGTTCTTCGCCATAATCCTACTTCCACGGCTAAACCTCGCCTCGGACGTGACGTTCGTGAGATTGCCGACAGGGTTCTAGCGGTGACGGCGAAAGGCAGGACTCGGTGGAGTCGGGCGATACTGGCCTCTCCGCTCAGTCGAAGAAAGTTCCAGAGGCAGCATAGGAAGGTCAAGAAGGCGGCGAACGTATTGAAGAAACCAGAGGTTATAAGAGAGAGAAGAAAGCTGCCGGCCGTGCAGAGGAAAGCGCGAGTCCTCAGCAGGTTAGTTCCCGGTTGCCGGAAGGTCTCGTTTCCGAGTCTTCTGGAAGAAACCACGGATTATATTTCGGCCTTGGAAATGCAAGTGCGGTCCATGACAGCACTCACCGAACTACTCGGAGGTGGCGCGGAGGCCGACCGGGCCGGGCGGCCTATACCGTGA 609 0.555 MAPLESIVEPISSETCPESNRRKRRKIGHDVRNDQNSLAPIPWRSKTEQRIYSSKLVEALRRVLRHNPTSTAKPRLGRDVREIADRVLAVTAKGRTRWSRAILASPLSRRKFQRQHRKVKKAANVLKKPEVIRERRKLPAVQRKARVLSRLVPGCRKVSFPSLLEETTDYISALEMQVRSMTALTELLGGGAEADRAGRPIP 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2211 202 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 130 189 IPR036638 GO:0046983
Lele13g2211 202 MobiDBLite consensus disorder prediction 1 35 - -
Lele13g2211 202 MobiDBLite consensus disorder prediction 16 32 - -
Lele13g2211 202 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 125 174 IPR011598 GO:0046983
Lele13g2211 202 CDD bHLH_AtIBH1_like 133 185 IPR044549 GO:0006355
Lele13g2211 202 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 44 188 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2211 Lele-ChrLele13 28502072 28502680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2211 43 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G17100 51.235 7.07e-39 131
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0227 05 1270686 1271294 Lele13g2211 13 28502072 28502680 CCT
Lele13g2211 13 28502072 28502680 Lele13g2211 13 28502072 28502680 ECH
Lele13g2211 13 28502072 28502680 Lele15g0200 15 1173717 1174325 hybridization
Lele13g2211 13 28502072 28502680 Lele16g0209 16 1179154 1179756 hybridization