Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2192 ATGCCACGGCCTGCTGATCGTATATCCAGTCCAGGGTCTTTTGATTCCGGTCAACTCTCTGATCGTCTCCCAAAACTGTTTCCTACCCGGGATACAAAATGGAATATCAGGGGAACAAGGGTATGCAGGAAACTGGTGCCCGGGATAGGCTGCAATTTGGAAATGAACGGACCCCTCATTGACGATATATCTGAGGATTTCTGGTTGCCAATCAACCAAAGGCCGACAGAAAATGTTGATCTACATAATATGGAGCAAGCTTCATTAGACACAATCGTCAAATATTGGATTCAAGCTCCTCCAAAAGATGGAATGGAAAGGAAAGTGGGTCTAGGAAAGTACGAGCAAGATGGGCAGAATTTCCGCAGTTTATATTACCTGGTTGCGGCTTCTGCCTGCTTCATGCACATTGTGAAAATCCAGGTGTTAGTAGAATGGGAGCAAAAAGTTCAAACTGAGGTTAAAGAAATAGGAAAAGTGTTTTATTGTGATCTCTGCAACAAGCAATACAAATTAGCGTTGGAATTTGAAGCACACCTGAGCTCATATGATCACAATCACAGAAAGGCAGTTTTCCCCCTCCTGATGCAACTTTCCTGGTGGGGGTTACAGCGCTTCAAACAAACGAAGGAAATGCATGGTAGTAGGAGTTGGGATGACAGGCAACAGCGAGAACAACAGCGTCATGGGAGAGAAATGGCTAAGTTCGCAATTGCTGATGCGCAGAAGGAACAACAGATTCAACAGCAACAGGAAGAATCTGGCCCTGCTACGGTTTCATCTGAATCTATAACTGCTACTGCACTTGCTGATCAGGACCAGCGGAAGACTGAAGTTTGGAACTCATCTGGGGGATCTGCAAAGAATCAAAAAGTTGCCATGTCCTCTATATTTCGCAGCTATGACGAGGAAGAGTAG 918 0.4499 MPRPADRISSPGSFDSGQLSDRLPKLFPTRDTKWNIRGTRVCRKLVPGIGCNLEMNGPLIDDISEDFWLPINQRPTENVDLHNMEQASLDTIVKYWIQAPPKDGMERKVGLGKYEQDGQNFRSLYYLVAASACFMHIVKIQVLVEWEQKVQTEVKEIGKVFYCDLCNKQYKLALEFEAHLSSYDHNHRKAVFPLLMQLSWWGLQRFKQTKEMHGSRSWDDRQQREQQRHGREMAKFAIADAQKEQQIQQQQEESGPATVSSESITATALADQDQRKTEVWNSSGGSAKNQKVAMSSIFRSYDEEE 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2192 305 MobiDBLite consensus disorder prediction 1 24 - -
Lele13g2192 305 Pfam Zinc-finger double-stranded RNA-binding 161 188 IPR022755 -
Lele13g2192 305 MobiDBLite consensus disorder prediction 212 305 - -
Lele13g2192 305 MobiDBLite consensus disorder prediction 242 296 - -
Lele13g2192 305 MobiDBLite consensus disorder prediction 212 238 - -
Lele13g2192 305 ProSitePatterns Zinc finger C2H2 type domain signature. 163 185 IPR013087 -
Lele13g2192 305 PANTHER FINGER DOMAIN PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G04180)-RELATED 59 116 - -
Lele13g2192 305 SUPERFAMILY beta-beta-alpha zinc fingers 158 189 IPR036236 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2192 Lele-ChrLele13 28420953 28423418 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2192 59 298 C2H2 Transcription Factor Family AT5G26610 39.373 1.81e-47 159