Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2164 ATGGATCATAATCCTCGTCCCAGTCGTGAATTGAGCTTCTTCAGCTCTGGCGACTTTCTCCCCCGTAATTCAGACCCGACATCCGAGAATCCCGGTGCCCCCCGCCATTCTCCCATCAAAGAAATGGATTTCTTCTCCCGTTCAACTGACAAAAGCTGTGATTCTAGCCCGCCGCCTCATCAGGATCCAGATCATGATGGAAATGGATCGGTTCCTTCCACTGACCAGCCTGTAAACACCAGCCTAAATCTAATACGTGTAAGTTCTGGAACGTCAGTCGCAGCAAGTAATGAAAATCCTAATACCGAGCTGAGTACGATCCAAGGCGAATTACGGAGACTTCATGTAGAGAACAGGAAGTTGAGAACTATGCTCGACCAGATCACCAAAAGCTATAGTCAACTACAAGCTCAGCTGTTCATCGCCCAGCAAAAACAAAACCCTATGAAGGTGGAAGCAAATGGCATAGTGTCGGGGAAACAGCTGGTGGACCCACGGCCATCTACCAATGTAGACATCAACGATGCATCGATTTCCGATGGTAAGACTCAATCAGTTTTGGTGCCCTCAAACAATGCGGAGAGTTGGGAGTCATCCATGAGCACCAAGTTACAAGACTCAAAGAGATCAGACGAACAAGTTTCGGATCAGGTCCCCTTCAGGAAAGCCAGGGTTTCCGTACGTGCAAGATCAGAAGCTCCTCTGATAAGCGATGGATGTCAATGGAGAAAATATGGTCAGAAAATGGCAAAGGGCAATCCTTGCCCTCGTGCTTATTATCGTTGCACTATGGCCGTAGGGTGCCCAGTTCGTAAGCAGGTGCAAAGGTGTGCCGAGGACAAGACAGTGCTAATAACAACCTACGAAGGAAGTCACAACCACCCCCTTCCTCCATCAGCCACCGCTATGGCGAATACAACATCCGCGGCGGCCGCAATGATCCTTTCCAGTTCAACCTCAAGTACGAACAAGGAAGGCTTAACACATTCTGCGGGATACATGTGTTCGATGGCCTACCCCTACGCATCAATGGCCACACTATCAGCGTCTGCACCATTTCCAACTATCACCCTCGACTTGACCCAAGTCCCCAACGCCATGCAGCTGCAGCGAGCACATCCCTCATCAGGGCCTACTTTCCCAGTACCATTAATGTTGCATGGGTGTCCTCGGGGACAGCTAACAGGACATCCCATGATGTTCCCGCAGAACTTGCTTCAACTAGGGCAGAGGATGCCTTCGAATCCGTCGTCTATGGTTGAGACGGTGACTGCAGCCATTACTTCTGATCCCAATCTGACTGCAGCACTGGCGGCTGCTATATCATCCATCATAGGGGCGCCCGGTGGCAGCGGTGCAGCTGGAAATAACACGGTTGCTGCACCTATCGGAGGTGCTATAAATATTCCAAATAATTACTTTAACCCCATTCCTGTGCTTCCTGTCTCCCCGCAGCAACTTGCTCGTTCATGCACTACGCTCTCCACCAACTAA 1494 0.5027 MDHNPRPSRELSFFSSGDFLPRNSDPTSENPGAPRHSPIKEMDFFSRSTDKSCDSSPPPHQDPDHDGNGSVPSTDQPVNTSLNLIRVSSGTSVAASNENPNTELSTIQGELRRLHVENRKLRTMLDQITKSYSQLQAQLFIAQQKQNPMKVEANGIVSGKQLVDPRPSTNVDINDASISDGKTQSVLVPSNNAESWESSMSTKLQDSKRSDEQVSDQVPFRKARVSVRARSEAPLISDGCQWRKYGQKMAKGNPCPRAYYRCTMAVGCPVRKQVQRCAEDKTVLITTYEGSHNHPLPPSATAMANTTSAAAAMILSSSTSSTNKEGLTHSAGYMCSMAYPYASMATLSASAPFPTITLDLTQVPNAMQLQRAHPSSGPTFPVPLMLHGCPRGQLTGHPMMFPQNLLQLGQRMPSNPSSMVETVTAAITSDPNLTAALAAAISSIIGAPGGSGAAGNNTVAAPIGGAINIPNNYFNPIPVLPVSPQQLARSCTTLSTN 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2164 497 Pfam WRKY DNA -binding domain 238 295 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g2164 497 SUPERFAMILY WRKY DNA-binding domain 229 297 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g2164 497 MobiDBLite consensus disorder prediction 1 78 - -
Lele13g2164 497 FunFam probable WRKY transcription factor 31 221 298 - -
Lele13g2164 497 ProSiteProfiles WRKY domain profile. 231 297 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g2164 497 MobiDBLite consensus disorder prediction 191 216 - -
Lele13g2164 497 Gene3D WRKY domain 220 298 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g2164 497 Coils Coil 118 138 - -
Lele13g2164 497 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 95 451 IPR044810 GO:0003700
Lele13g2164 497 MobiDBLite consensus disorder prediction 17 31 - -
Lele13g2164 497 SMART WRKY_cls 236 296 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2164 Lele-ChrLele13 28290280 28292782 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2164 1 497 WRKY Transcription Factor Family AT4G01720 42.553 1.08e-85 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele13g2164 WRKY 6e-24 CL0274