Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2158 ATGAGCGGAAAAGTGATTGTGCCCGCCGTTTCTATCATCCTCGTGGTGGGTGTGGCCCTCGGCGTCGTCGGCGTCGTCCACTATAGGAACAAAGACAGCAACAATAATGGTCAGGCTACAGAGGTGAACACCCACACAAAGGCCGTTGCTGCCCTATGCCAAAGCTCCGACGATCCCAAGCTCTGCCACAGCACGCTAGACCCCATCAACAGCACCGACCCTAAGGATTATATAAAGGCGACGGTGGAATCCGCCATGAAAACCGTCATCCAGTCCTTCAATTTGACCGACAGGGTCGCCATAGAGCAAGGGAATAGCAGCACAAGAGGCATAAAGATGGCCGTCGAGGATTGCAAGGACTTGTTGCAATCTGCAATAATGGAACTTCAAGCATCGGGTGTTCTGGTTCAGGACAACAATGCTCGGAGCGTGACCGACAGGCAAGATGACCTCAAGAACTGGTTGAGCGCTGTCATCGCCTACCAGCAATCATGTCTCGATGGGTTTTCCACGGACGACGATGGAGAGAAGGCGATCCAGCAACAATTACAAACAGGTGGCCTGGACAATGTGGAGCAGCTCACAGGGTTGGCACTTGATGTTGTGGCTGGCATTTCCCAGTTGCTCTCCGTCTTCGACTTGGACTTGGACGTGAAACCTGCTTCTCGTCGACTTCTAGGCAACGTGGAGGTGGATAACGACGGCTATCCCACATGGTTGTCCAGCACCCAACGCCAGCTCATCGAGCTGCCCAACACCGGACATCCTACGAATCTGCCCAACGCCGTGGTTGCCCAGGACGGAAGTGGCCAGTTCAAGACCATTCAAGAAGCCGTCGACTCATACCCACCAAAGTTTGAAGGCAGATTCACTATCTACGTCAAGGCCGGTACCTACAACGAATACGTCCACATTACCAAGAAGCAGCCCAACATCCTCATGTACGGTGATGGCCCCACCAAGACCATCGTCACCGGCAACAGGAGCTACACCTCCGGTTGGAAAACAATCCAAACTGCCACCTTCACCACCTTGGGTGACGGCTTCATTGCCAAGTCGATGGCCTTCGAGAACACCGCCGGGCCTGAGGGACATCAAGCAGTTGCACTGAGGGTTATGGGTGATCGCTCAGCTTTCTTCGACTGTGCTTTTCACGGCTACCAAGACACCTTGTACGCACACGCCAAACGTCAATTCTATCGCAACTGTGAGATATCCGGCACAGTGGACTTCATCTTCGGATACAGCAGCACCTTGGTCCAGAACTCCAGAATCTTGCTCAGGAAGCCCATGGATAACCAGCAAAACATCGTCGCCGCCGACGGCACTGCTCAAAAGCAAATGCGCACAGGAATTGTCCTCCAGAACTGCCAGATCATGCCCGACGCCAGCCTCACCGCCGACAGGTTGACCGTCAAGTCCTACCTGGCCAGGCCATGGAAGGCATACTCCAGGGCTATCTTCATGGAAAATGAAATCGGTGATCTCATCCAAGCCGACGGTTATCTGCCATGGATGGGCAACATGTACCTTGACACCTGCTACTTCGCCGAGTTTGCAAACACCGGTCCCGGCGCCGCCACTAACAACAGGGTCAAGTGGAGCCGCGGCGTCCTCACCAAGGCTGATGCTACTCAATACACCGCTGAACCTTGGCTTCAGGCCGGCTCATGGTTGCCCGCCACCAGCATTGCCTTCGACAGCGGTCTCACCAAGGCTTAA 1722 0.5447 MSGKVIVPAVSIILVVGVALGVVGVVHYRNKDSNNNGQATEVNTHTKAVAALCQSSDDPKLCHSTLDPINSTDPKDYIKATVESAMKTVIQSFNLTDRVAIEQGNSSTRGIKMAVEDCKDLLQSAIMELQASGVLVQDNNARSVTDRQDDLKNWLSAVIAYQQSCLDGFSTDDDGEKAIQQQLQTGGLDNVEQLTGLALDVVAGISQLLSVFDLDLDVKPASRRLLGNVEVDNDGYPTWLSSTQRQLIELPNTGHPTNLPNAVVAQDGSGQFKTIQEAVDSYPPKFEGRFTIYVKAGTYNEYVHITKKQPNILMYGDGPTKTIVTGNRSYTSGWKTIQTATFTTLGDGFIAKSMAFENTAGPEGHQAVALRVMGDRSAFFDCAFHGYQDTLYAHAKRQFYRNCEISGTVDFIFGYSSTLVQNSRILLRKPMDNQQNIVAADGTAQKQMRTGIVLQNCQIMPDASLTADRLTVKSYLARPWKAYSRAIFMENEIGDLIQADGYLPWMGNMYLDTCYFAEFANTGPGAATNNRVKWSRGVLTKADATQYTAEPWLQAGSWLPATSIAFDSGLTKA 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2158 573 TIGRFAM PME_inhib: pectinesterase inhibitor domain 42 198 IPR006501 GO:0004857
Lele13g2158 573 PANTHER PECTINESTERASE 18 562 - -
Lele13g2158 573 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 202 IPR035513 -
Lele13g2158 573 Pfam Plant invertase/pectin methylesterase inhibitor 48 200 IPR006501 GO:0004857
Lele13g2158 573 CDD PMEI-like_3 51 206 - -
Lele13g2158 573 FunFam Pectinesterase 256 570 - -
Lele13g2158 573 SMART PMEI_2 44 201 IPR006501 GO:0004857
Lele13g2158 573 Pfam Pectinesterase 261 554 IPR000070 GO:0030599|GO:0042545
Lele13g2158 573 Gene3D Invertase/pectin methylesterase inhibitor family protein 43 206 IPR035513 -
Lele13g2158 573 FunFam Pectinesterase 45 206 - -
Lele13g2158 573 ProSitePatterns Pectinesterase signature 2. 405 414 IPR033131 -
Lele13g2158 573 SUPERFAMILY Pectin lyase-like 261 568 IPR011050 -
Lele13g2158 573 Gene3D - 257 570 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2158 Lele-ChrLele13 28255949 28257762 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2158 1 570 Carbohydrate Esterase AT2G47030 40.165 4.26e-141 419