Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2156 ATGCACAATGTGCATGCAAAATGTAAGAGTTGGAACATGGTAATATATACCATTGCTTACGCCGTATTCATTTTGTTCATAATCCATGAGGTTCATAGATGTTTCCTGCCGTATCTTGAGTGTGATGCCACTGCTTATCATGTCCTTCGTCCATTCCAAGAAATGAGTGGGAAATTAATTGTGTCTGCGGTCTCCCTCATCCTCGTGGTGGGGGTAGCGATCGGTGCGGTCGTAGTGGTTCACAACAAGAACAGTGACCCTCAGGTCACTGAACGTCAGAATGCGGTGAGGGCAATGTGCCAGAACACGGAGGACCAGAAGCTTTGCCACGACACTCTGGGCAACGTGCAGAACAGCTCAGACCCAAAAGCATTCTTAACCGCCGCCGTGGAAGCCTCTGTCAACAGCCTGATCAAGGCATTGAACATGAGCGATAAGCTCAGCATTGAACAAGGTAACAGCACCCCAGGCATCGTCAAGATGGCCACCAATGACTGCAAGGAGTTGCTCGAATTCGCCATGGATAGCCTCCAGGCCTCCAAGGACTTCCTGGGGAACAACAGCATCCAAACCTTGAACGATCGATCCCCTGACTTCAAGAATTGGCTCGCTTCTGTTGTCTCTTACCAACTGGCTTGCATGGATGGGTTCGACGACAACGTCGACGGTGCCAAACAGATCAAGACACAGATTCAAGAGAATGGTTTGGACGACGTGGGGAAGCTCACCGGCATAGCCCTAGATATGATGGCTGATTTTGAAAACATCCTGGGTCAGTTTGGTTTGAAGCTGAAAGTGAACCCTGGTTCTCGTCGTCTTCTTCAGGTGGACAGCGCAGGCTATCCCACTTGGTTCTCAGCCGCTGATAGGAAGCTATTGGACGTAAAGCCGAGGGGAAGGGGAAATCATATCAAGCCCAACGTGGTGGTGGCCCAGGATGGTAGTGGCCAGTTCAAGACCATCATGGACGCCGTTAACTCTTATCCTAAGGGTTTGCAAGGAAGATACATCATCCAAGTCAAGGCTGGCACATACCGTGAGTACGTCACGATTCCCAAGACAGCCGTCAATATCCTTATGTACGGTGCCGGCACAGATAAAACCGTCGTCACCGTAAATCTTGGGAACGGGTTCATCGCCAAGTACATGACATTTGTGAACTCCGCTGGTCCTGAAAAGCACCAAGCAGTGGCATTTAGGAACCAGGGAGATATGTCCGCTGCATTCGATTGTTCCTTTGTGGGTTACCAGGACACGTTGTACGCTCAAACCAATCGTCAATTCTACAGGAATTGTGACATCTCCGGCACCGTGGACTTCATATTTGGAGTGTCCACCGTGTTGATCCAGAGCTCTCGAATCATCGTAAGGAAGCCAATGGACAACCAATTCAACACGATGACGGCAGACGGCAGAAACATGCAGAACATGCCCACAGGGACAGTGATCCAGAACTGCGACATTGTTCCAGAGAATGCTCTCTTCCCCGTGAGGTTTAAGATCAGATCGTACCTGGGAAGGCCGTGGAAGCAGTATGCTAGAACTGTGGTGATGGAATCCAGAATAGCTGACTTTATTCAACCCGATGGGTGGACTCCATGGGAAGGAAGCTTTTTCCAGAAAACTTTGTACTATGCAGAGTACAACAACGAAGGACCTGGTGCTAATGTGGCCAAGAGGGTTAAGTGGCCGGGTTACAAGGGCCTCGTAAGTAAGGATGTTGCTGCTCAGTTCACCGCCGGCCAATTCCTCAAAGGTGGGCCCACTTCCCGATCTGAGGACTGGATGAAGCCCCTCCATCTTCCTTTTGACATTGGCTTCACCAAGCCTTGA 1833 0.5014 MHNVHAKCKSWNMVIYTIAYAVFILFIIHEVHRCFLPYLECDATAYHVLRPFQEMSGKLIVSAVSLILVVGVAIGAVVVVHNKNSDPQVTERQNAVRAMCQNTEDQKLCHDTLGNVQNSSDPKAFLTAAVEASVNSLIKALNMSDKLSIEQGNSTPGIVKMATNDCKELLEFAMDSLQASKDFLGNNSIQTLNDRSPDFKNWLASVVSYQLACMDGFDDNVDGAKQIKTQIQENGLDDVGKLTGIALDMMADFENILGQFGLKLKVNPGSRRLLQVDSAGYPTWFSAADRKLLDVKPRGRGNHIKPNVVVAQDGSGQFKTIMDAVNSYPKGLQGRYIIQVKAGTYREYVTIPKTAVNILMYGAGTDKTVVTVNLGNGFIAKYMTFVNSAGPEKHQAVAFRNQGDMSAAFDCSFVGYQDTLYAQTNRQFYRNCDISGTVDFIFGVSTVLIQSSRIIVRKPMDNQFNTMTADGRNMQNMPTGTVIQNCDIVPENALFPVRFKIRSYLGRPWKQYARTVVMESRIADFIQPDGWTPWEGSFFQKTLYYAEYNNEGPGANVAKRVKWPGYKGLVSKDVAAQFTAGQFLKGGPTSRSEDWMKPLHLPFDIGFTKP 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2156 610 Pfam Pectinesterase 307 586 IPR000070 GO:0030599|GO:0042545
Lele13g2156 610 CDD PMEI-like_3 98 251 - -
Lele13g2156 610 ProSitePatterns Pectinesterase signature 2. 434 443 IPR033131 -
Lele13g2156 610 TIGRFAM PME_inhib: pectinesterase inhibitor domain 78 221 IPR006501 GO:0004857
Lele13g2156 610 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 93 250 IPR035513 -
Lele13g2156 610 Gene3D - 301 606 IPR012334 -
Lele13g2156 610 FunFam Pectinesterase 4 304 607 - -
Lele13g2156 610 Gene3D Invertase/pectin methylesterase inhibitor family protein 91 253 IPR035513 -
Lele13g2156 610 Pfam Plant invertase/pectin methylesterase inhibitor 95 249 IPR006501 GO:0004857
Lele13g2156 610 SUPERFAMILY Pectin lyase-like 304 588 IPR011050 -
Lele13g2156 610 PANTHER PECTINESTERASE 70 597 - -
Lele13g2156 610 SMART PMEI_2 91 249 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2156 Lele-ChrLele13 28245099 28248804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2156 55 607 Carbohydrate Esterase AT2G47030 38.017 3.00e-127 385