Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2137 ATGGAGAAGAAAGAGATGCGTGTCAAGACGGAGGAAGCAGCTCGATCCACTTCGTTTGAGGATTATAATTCAAACAGTTTCCCACTTTCGAGTGTCTTTGACTTTCATGAAGTGGAAAAGAGCTCTTTAGGGTTTATGGAATTACTGGGTGTGCGGGAGCGGGACTATGGTTCCTCGCTGGATTTGCCCCCGCAACTATTTCCTTATGACCTCAAAAACCAGTGTGCCGCCGCAGAAAGCTTCTGCGAGCCGTTGAATCAACAGCCTGCCACTCCAAACTCTTCATCCATTTCATCTGCGTCCAGTGAGGCAGTCATTGATGAACACGCTAAAACTGTAGTTCAACGAGGAGATGAACCGCCAAAGACCAAGAACCAGTTGAAGGCAAAGAAGACAAATAAGAAGAAACAGAGGGAACCGAGATTCGCGTTCATGACCAAAAGCGAGGTGGATCATCTGGATGATGGGTACAGATGGAGAAAGTACGGTCAAAAAGCTGTAAAGAACAGCCCCTTTCCCAGAAGCTACTACCGTTGCACCTGTGCATCGTGTAATGTGAAGAAACGAGTGGAACGATCCTTCACTGATCCAAGCATTGTTGTCACGACCTACGAAGGCCAACACACACATCCGAGCCCACTCATGCCTCGCTCGACTCTCGCCGGAGCTTTGGTCCCAGCGGTGGTGTCCGCCGGATGTGGTTCAGCCGTAATATCGGGAAACTTATCTCAACAGTATCATGAGCAGCTCCAACATCATGATCGTCAATTCCTAGCTAACACATTGTCGTCTTTGGGTTTTCCTCGCATTTGCGGTTCAAAGAATGATATTGCCTCTTTTCCTCAGGACAGAATGCCTTGTAATCCAGGGACCGATGCTTTTTTAAGGGACCATGGGCTTCTCCAGGACATTATCCCTTCCCATATGTTGAAAGAAGAGTAG 942 0.4798 MEKKEMRVKTEEAARSTSFEDYNSNSFPLSSVFDFHEVEKSSLGFMELLGVRERDYGSSLDLPPQLFPYDLKNQCAAAESFCEPLNQQPATPNSSSISSASSEAVIDEHAKTVVQRGDEPPKTKNQLKAKKTNKKKQREPRFAFMTKSEVDHLDDGYRWRKYGQKAVKNSPFPRSYYRCTCASCNVKKRVERSFTDPSIVVTTYEGQHTHPSPLMPRSTLAGALVPAVVSAGCGSAVISGNLSQQYHEQLQHHDRQFLANTLSSLGFPRICGSKNDIASFPQDRMPCNPGTDAFLRDHGLLQDIIPSHMLKEE 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2137 313 MobiDBLite consensus disorder prediction 111 126 - -
Lele13g2137 313 FunFam WRKY transcription factor 57 139 213 - -
Lele13g2137 313 SUPERFAMILY WRKY DNA-binding domain 145 213 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g2137 313 Gene3D WRKY domain 137 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele13g2137 313 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 87 243 IPR044810 GO:0003700
Lele13g2137 313 MobiDBLite consensus disorder prediction 111 138 - -
Lele13g2137 313 Pfam WRKY DNA -binding domain 154 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g2137 313 SMART WRKY_cls 153 212 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g2137 313 ProSiteProfiles WRKY domain profile. 148 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele13g2137 313 PIRSF WRKY_txn_fact_IIc 1 313 IPR017396 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2137 Lele-ChrLele13 28115207 28116535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2137 19 313 WRKY Transcription Factor Family AT2G47260 46.064 9.66e-68 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele13g2137 WRKY 3.2e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0151 06 931350 934082 Lele13g2137 13 28115207 28116535 CCT
Lele13g2137 13 28115207 28116535 Lele15g0276 15 1557614 1558926 hybridization
Lele13g2137 13 28115207 28116535 Lele16g0290 16 1614186 1617119 hybridization