Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2136 ATGGGACTTTCGTCACAGCATTTTTTCCCTGTTCCTTCCCTGTCATTGAAAAATCAGCTTATAGAAGCTGATCAAGAAGACAGAGATTCATCTTATGGGTATATGTGGAGCAGAGTGATGGCAGGTCGAGGCATGAAGCAGAAGAAGTGGAGCAGTGGGACGACAAGAAAGATTTTAATGAAGCGGAGGGCTCGCGTGATAGAAGGTTCTAGAAGACGAGGGGCCACGGAGATTAAGACGAGGGTCAGAACTTTGAAGAGGCTTATACCCAGAATTAACAGCGAGGCGATGGGGTTGGATGGGCTCTTCAGGGATACAGCCGAGTACATATTGTCGTTACAAACGAGGGTGAGAGTCATGCAGATTATGGTGGACGTGTTGACAGGATCGCGAGACATGAAATCGCTTCCTGTTCCGTATCAATTTGACATTCTTTAG 438 0.468 MGLSSQHFFPVPSLSLKNQLIEADQEDRDSSYGYMWSRVMAGRGMKQKKWSSGTTRKILMKRRARVIEGSRRRGATEIKTRVRTLKRLIPRINSEAMGLDGLFRDTAEYILSLQTRVRVMQIMVDVLTGSRDMKSLPVPYQFDIL 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2136 145 CDD bHLH_AtIBH1_like 67 124 IPR044549 GO:0006355
Lele13g2136 145 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 75 130 IPR036638 GO:0046983
Lele13g2136 145 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 36 127 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2136 Lele-ChrLele13 28109121 28109873 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2136 45 130 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 44.186 5.62e-15 64.7