Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2130 ATGAAGCCGCTAGGCGTTGTTGGGGCCCCTACCATTTCTTCTTTTGCGCCGTCGATTTCCCCTTTCCTCCCCAAGCGCCTTCAAAGCCGTCGTTTTTGCGTTTCCTGCACTTCTTCAGGATCTAGAACAGTAGAACATGCGAAAACTGCAGCTTCAATTCCAGAATACAAGGCCGGTGTATTTGATGAATTGTTCCTCAATTTGTTCCGCAACAAATTAGTAGCGGAGGTTGGATGGGATTCAAACAAACCTGGATATGATGGACTTATTGAAGTTGCGAACCGTCTAATGATGAATGGCAGAACAAGAGCTGATACGGTTGAAGCTGCGATACGGGTATTGAGGTCCTTGTTTCCTCCATTTCTTTTGGAGCTATATAAAATGCTCGTAGCTCCTATAGGAGGGGGCAAAGTTGCTGCTATGATGGTCGCAAGGGTTACTGCACTGACCTGTCAATGGCTAATGGGCCCGTGCAAGGTCAATTCTGTCGACTTGGATGATGGAGCCTCCTGCAGTAGTGGGGTTTACGTGGAAAGATGCAAGTACCTGGAAGAAAGCAAATGTGCCAGTATTTGCATCAATACTTGTAAATTTCCGACACAGACATTCTTCATGGATCATATGGGAGTTCCACTGCTAATGGAGCCCAACTTCAGTGATTATAGTTGTCAGTTCAAATTTGGAGTCCTTCCACCACAACCGGAAGATGACGGCGTCCTGAAAGAGCCCTGCCTGGTGGCATGTCCACATGCTGCCAAGCGAAGAGTAGTTGCCAGAAACATGGATGAAGCTCCGTGTCCCAAGAGTTGA 810 0.4728 MKPLGVVGAPTISSFAPSISPFLPKRLQSRRFCVSCTSSGSRTVEHAKTAASIPEYKAGVFDELFLNLFRNKLVAEVGWDSNKPGYDGLIEVANRLMMNGRTRADTVEAAIRVLRSLFPPFLLELYKMLVAPIGGGKVAAMMVARVTALTCQWLMGPCKVNSVDLDDGASCSSGVYVERCKYLEESKCASICINTCKFPTQTFFMDHMGVPLLMEPNFSDYSCQFKFGVLPPQPEDDGVLKEPCLVACPHAAKRRVVARNMDEAPCPKS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2130 269 Pfam Beta-carotene isomerase D27-like, C-terminal 153 235 IPR025114 GO:0005506
Lele13g2130 269 PANTHER BETA-CAROTENE ISOMERASE D27 46 253 IPR038938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2130 Lele-ChrLele13 28073026 28076132 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2130 13 28073026 28076132 Lele05g0342 05 1943836 1944676 CCT
Lele13g2130 13 28073026 28076132 Lele06g0161 06 975025 975459 CCT
Lele13g2130 13 28073026 28076132 Lele07g0360 07 2001905 2003249 CCT
Lele13g2130 13 28073026 28076132 Lele08g0164 08 1006112 1006546 CCT
Lele13g2130 13 28073026 28076132 Lele15g0281 15 1593307 1596548 hybridization
Lele13g2130 13 28073026 28076132 Lele16g0296 16 1639541 1650490 hybridization