Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele13g2126 | ATGGATGGTACTACCTCGCCTAAACTTGAGCCAGAAGCATCTCCAGCTCCCACGCCAGAAATTCAAGAATCCAAAAAAAGGAAAATTGTTCAGAGAACAGTTGTGGGGGTGAAAGTTGGAGAAAATGTTAGTAAACTGAAGAATGAAGGGCTACCATCGGACTCATGGTCTTGGAGGAAATATGGACAAAAACCTATTAAAGGGTCTCCTTATCCAAGAGGCTATTACAAGTGTAGCACATCCAAAGGTTGTTCGGCCAAAAAGCAAGTAGAGAGGTGCAGAACAGATGCTTCCATGCTCATTGTTACCTATACTTCTTCCCATAACCATCCAGCTCCAGAATTCAAAGAATCAAAAACTCAAGCTACCGAAGATCTCACACCTAATACTTCAAAGGAGAAAGAGCAAGACCGAGAGGAAGAGAAGAAATATCTTCAACTTGCAACATGTGCAAATGAAGAAAATTTTCATTACCTGCGATCGCCGATAGGCTGTTCTGAAGACATTATTATTGACCAAGAGGATCTTTTCAAATTTAACTCAGAGAAAACGCAAAATAGGATAGATCTTCTCTTAGAGGAAGAGCCGCTCTGTTATTCTCAGCTCAAGAGCCCCTCAAAGCTCAAATCGGAGGAACTCGACTTCTTCGACGAGCTTGAAGAGTTACCCATGTCTCCGTCGTTGTGGAACATGATGAGGAACAATTTTTCTGAGGAAAGGATTCCGGTTGCCCCTTCATGA | 741 | 0.4238 | MDGTTSPKLEPEASPAPTPEIQESKKRKIVQRTVVGVKVGENVSKLKNEGLPSDSWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMLIVTYTSSHNHPAPEFKESKTQATEDLTPNTSKEKEQDREEEKKYLQLATCANEENFHYLRSPIGCSEDIIIDQEDLFKFNSEKTQNRIDLLLEEEPLCYSQLKSPSKLKSEELDFFDELEELPMSPSLWNMMRNNFSEERIPVAPS | 246 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele13g2126 | 246 | Pfam | WRKY DNA -binding domain | 54 | 111 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Lele13g2126 | 246 | SMART | WRKY_cls | 52 | 112 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Lele13g2126 | 246 | FunFam | WRKY transcription factor 65 | 25 | 113 | - | - | |
| Lele13g2126 | 246 | PANTHER | WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED | 18 | 228 | IPR044810 | GO:0003700 | |
| Lele13g2126 | 246 | ProSiteProfiles | WRKY domain profile. | 47 | 113 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Lele13g2126 | 246 | MobiDBLite | consensus disorder prediction | 1 | 27 | - | - | |
| Lele13g2126 | 246 | MobiDBLite | consensus disorder prediction | 107 | 140 | - | - | |
| Lele13g2126 | 246 | Gene3D | WRKY domain | 37 | 114 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
| Lele13g2126 | 246 | SUPERFAMILY | WRKY DNA-binding domain | 49 | 113 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele13g2126 | Lele-ChrLele13 | 28051206 | 28052182 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele13g2126 | 24 | 228 | WRKY Transcription Factor Family | AT4G01250 | 41.262 | 6.57e-39 | 135 |
Transcription factors information