Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2124 ATGGTGTCCAAAGCAGCAGACTCTGCGATCAAACTAAGAAAATCACATGGTCAGCCAGCAAATGATGCTGTTGGAACCTTGCCATGCAAGATTGATCAGCTGGAAAAGGAAATCCAGGCGGAGAGATTTGTATCAATTAAAGAAAAACTATTGAGGAATGGAAAGAAGGTACAGTGTCATGTTTCCGAGGTTTTCTCAGCAATATCAAAAAGGGATTCTTTACATGCACAGGAAAATAGGATTAATCAGATGCTTTCCTCAAGAATTGACCACCCTCTATTTAAGTTCAATGCTATATCTCAAGGTTCTGGTGACAAAGATCTCATCAACAGCCTAGATGTAATTTTTACAACAAGTATCAAGATGCCTTACACCGAAAGATTACCACCATACACATCTTGGATATTTTTGGACAGAAATCAGAGAATGGCTGAAGATCAGTCTGTAGTCGGCAGAAGGCGTATCTACTATGATCAACATGGAAGTGAAGCGTTAATATGCAGTGACAGTGAGGAAGAGCTAACAGAACCTGAGGAAGATAAACATGAATTTACTGGTGCTGAAGATCGAATTTTATGGATGGCATTTGAGGAATATGGGTTAACTGGGGAAGTATTGGATACTGTGAGCGAGTCTGTTGGAGGTACTAGACAGGAAATTCAGGATAGGTACAAAAGTCTCAAGGAAAAGAACACCGGGAGGCAGGACCAGTGGTCTGAAGGTTCTGGAGATTATGAATCTCGGATTGGCATAAGTTTGGAGGAAAGCCTGAGTACTGCTTTAGATTCTTTTGATAACCTTTTTTGTCGCCGGTGCATGATATTTGATTGTCGCTTGCATGGATGTTCTCAACCCCTAATATATCCTAGTGAAAAGCAGCCAGTTTGGTTTGAACATGAAGAGGACAGGAAGCCATGCAGTGATCAGTGTTACCTAAGGTTAAAGGCTGAGAAAACTTCATCAGATCCAAGGTGTCTGCAGGGAGATAAACCCACAACTACGGAGGAGGGAGTATTGACTTTGGCACCCACGGGTGCAGCAGAGCCAGGAAATCAGAGTACTACAACTACCTTGGTGGATGAAAGATGCAATTCTACGAACACAACACCTTCTCCAACAGAAGTTGCTGGATGTAAAGATCTCAACTTAAATATGCCTGTTGCAGAGAGTCTGGGGAAACGGAAGACCATAAATCAATCAGATAAAGCGATGTGTGACTTAACATTGCTTCCTGATGATTCGGAGAGTTCTTGTAAAAAGCAAAAGAAAATCACAGATAATGATGTAGTCACTGTAATTAATGATTTTAACAGAGACCTAAATGTCAGTGCATGTGATGAAAAATGTGTTATTGCTTCTGAATGTTTAAATGATTCTGTAGAGCATACTTCTAACAAATCAATACTTTCTGGGAGCACTTGTCATGGTGAACATGGAAATGTTGAGGATGGATCTAAAGATGGCATGGCTGAGGCAGAATTCAATGAGTCCTCCAATTTCATGAATGAGCATGTTGAAGGGATGCAAAGTCTTTCAGAATGGAAACATCTGGAGAAAGAGTTATACTTGAAGGGAGTAGAAATGTTTGGGAGAAACAGTTGCCTCATAACAAGGAATTTACTTTCTGGCCTAAAGACCTGCATGGAAGTAGCTACTTACATGCATGCTGGTGGAGCGTCAGTTCCCTACAGATCTAATGTTCCCCCAAATTCACTCAGGAATGACAATGGAAAAACTGATGCAGAATGCCCAGACCAAGAGATGCCAACAAGAGCAAGATTGCTACGGAAAAGAGGCAAAACAAGGAAATTTAAATATTCTTGGAAATCTGCTGGCCACCCATCAATATGGAAAAGAATTGCAGATGGAAAAAACCAATCTTGCAAGCAATATACACCCTGTGGATGTCAATCGATGTGTGGAAAGCAGTGTCCATGCCTTCATAATGGAACTTGCTGTGAGAAGTATTGTGGGTGCTCCAAAAGCTGCAAAAATCGATTCAGAGGTTGCCACTGTGCTAAGAGTCAATGCAGAAGTCGACAATGTCCATGCTTTGCTGCTGGACGCGAATGTGACCCAGATGTTTGTCGAAACTGCTGGGTTAGTTGCGGCGACGGTTCATTAGGAGAGCCACCTAAACGTGGAGATGGTCAATGTGGAAATATGAGGCTTCTTTTAAGGCAACAACAGAGGATTCTGTTGGCAAAGTCTGATGTCGCAGGATGGGGAGCATTCTTAAAGAACCCAGTTAACAAAAATGATTACCTAGGAGAATACACTGGGGAACTCATCTCCCACCGAGAAGCAGACAAGCGTGGAAAAATATATGATCGTGCCAACTCATCATTCCTTTTCGATTTGAATGACCAGTATGTTCTGGATGCTTATCGCAAAGGAGACAAACTAAAATTTGCGAACCACTCATCAAATCCAAACTGTTATGCAAAGGTGATGCTGGTTGCTGGGGATCATCGAGTGGGAATCTTTGCAAAGGAACACATTGAAGCGAGTGAGGAGCTGTTCTACGATTATCGTTATGGTCCAGATCAAGCACCAGCCTGGGCTCGCAAACCTGAGTCTTCCAAGAGAGACGAATCGGCAGCTTCTCAAGGAAGGGCCAAGAAACACCAGTCGCATTGA 2640 0.4239 MVSKAADSAIKLRKSHGQPANDAVGTLPCKIDQLEKEIQAERFVSIKEKLLRNGKKVQCHVSEVFSAISKRDSLHAQENRINQMLSSRIDHPLFKFNAISQGSGDKDLINSLDVIFTTSIKMPYTERLPPYTSWIFLDRNQRMAEDQSVVGRRRIYYDQHGSEALICSDSEEELTEPEEDKHEFTGAEDRILWMAFEEYGLTGEVLDTVSESVGGTRQEIQDRYKSLKEKNTGRQDQWSEGSGDYESRIGISLEESLSTALDSFDNLFCRRCMIFDCRLHGCSQPLIYPSEKQPVWFEHEEDRKPCSDQCYLRLKAEKTSSDPRCLQGDKPTTTEEGVLTLAPTGAAEPGNQSTTTTLVDERCNSTNTTPSPTEVAGCKDLNLNMPVAESLGKRKTINQSDKAMCDLTLLPDDSESSCKKQKKITDNDVVTVINDFNRDLNVSACDEKCVIASECLNDSVEHTSNKSILSGSTCHGEHGNVEDGSKDGMAEAEFNESSNFMNEHVEGMQSLSEWKHLEKELYLKGVEMFGRNSCLITRNLLSGLKTCMEVATYMHAGGASVPYRSNVPPNSLRNDNGKTDAECPDQEMPTRARLLRKRGKTRKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHNGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGSLGEPPKRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGIFAKEHIEASEELFYDYRYGPDQAPAWARKPESSKRDESAASQGRAKKHQSH 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2124 879 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 25 878 IPR045318 GO:0006338|GO:0018024
Lele13g2124 879 MobiDBLite consensus disorder prediction 856 872 - -
Lele13g2124 879 FunFam Putative histone-lysine N-methyltransferase EZH2 631 847 - -
Lele13g2124 879 ProSiteProfiles SET domain profile. 730 845 IPR001214 GO:0005515
Lele13g2124 879 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 879 IPR025778 GO:0031519
Lele13g2124 879 SMART CXC_2 665 702 IPR033467 -
Lele13g2124 879 Pfam SET domain 741 844 IPR001214 GO:0005515
Lele13g2124 879 Pfam CXC domain 669 700 IPR041355 -
Lele13g2124 879 CDD SET_EZH 730 846 - -
Lele13g2124 879 SMART set_7 730 851 IPR001214 GO:0005515
Lele13g2124 879 MobiDBLite consensus disorder prediction 1 20 - -
Lele13g2124 879 MobiDBLite consensus disorder prediction 852 879 - -
Lele13g2124 879 ProSiteProfiles CXC domain profile. 617 716 IPR026489 -
Lele13g2124 879 SUPERFAMILY SET domain 601 850 IPR046341 -
Lele13g2124 879 MobiDBLite consensus disorder prediction 224 244 - -
Lele13g2124 879 Gene3D SET domain 631 847 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2124 Lele-ChrLele13 28035956 28042060 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2124 719 848 C2H2 Transcription Factor Family AT2G23740 26.531 3.64e-09 58.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele13g2124 SET 3e-10 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2124 13 28035956 28042060 Lele15g0288 15 1627554 1633631 hybridization
Lele13g2124 13 28035956 28042060 Lele16g0301 16 1666992 1678123 hybridization