Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2113 ATGCGGCGGGGGTTCCACGGCTCGGGATTAAAGGGTACGAGTGGTGGTCCGGGCACCAAGTTTGTCGGGCCATTCCCCGTCGCCACCAGCTTCCCTCAAGTCATCACCACCGCTGCTTCATTCAATGCATCCCTGTGGGAGGCTATCGGACGGGGAGTGTCAGACCAAGCAAGAGCAATGTATAAGGGAGGAACGGCGTGGTTGACTTACTGGAGCCCAAACGTGAACATATTCAAGGATCCCGGGTTGGGACGTGGACAGGAAACTCCTGGAGAGGATCCCGTCGTGGCCGGTAGATATGCCGCCCATTACGTGAGGGGGTTACAGGGAACGGATGCCAACCGGTTGAAGGTTGCCGCTTGTTGCAAGCATTTTACGGCTTACGATCTTGATAATTGGAATGGCATGGATCGCTTCCAATTTAATGCTCTAGTTAGCAAGCAGGACATAGAGGACACGTTCGACATGCCATTCAGGATGTGTGTGAAGGAAGGGAATGTGGCGAGTGTGATGTGTTAG 519 0.5414 MRRGFHGSGLKGTSGGPGTKFVGPFPVATSFPQVITTAASFNASLWEAIGRGVSDQARAMYKGGTAWLTYWSPNVNIFKDPGLGRGQETPGEDPVVAGRYAAHYVRGLQGTDANRLKVAACCKHFTAYDLDNWNGMDRFQFNALVSKQDIEDTFDMPFRMCVKEGNVASVMC 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2113 172 Gene3D - 4 172 IPR036962 GO:0004553|GO:0005975
Lele13g2113 172 SUPERFAMILY (Trans)glycosidases 23 172 IPR017853 -
Lele13g2113 172 Pfam Glycosyl hydrolase family 3 N terminal domain 28 171 IPR001764 GO:0004553|GO:0005975
Lele13g2113 172 PANTHER SUGAR HYDROLASE-RELATED 13 172 IPR044993 GO:0009044|GO:0045493
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2113 Lele-ChrLele13 27971705 27972325 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2113 8 172 Glycoside Hydrolase AT1G02640 80.120 2.13e-91 280
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0170 06 1039531 1041936 Lele13g2113 13 27971705 27972325 CCT
Lele07g0370 07 2093054 2095413 Lele13g2113 13 27971705 27972325 CCT
Lele08g0174 08 1085452 1087857 Lele13g2113 13 27971705 27972325 CCT
Lele05g0351 05 2012306 2017464 Lele13g2113 13 27971705 27972325 CCT
Lele13g2113 13 27971705 27972325 Lele16g0310 16 1727790 1730378 hybridization