Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2110 ATGGAGAAAGTGGGGGCAACGGAAAGGGAAGTTAGAGAAGCTTTCAGACAAACCCATCTGGCAGTCTATCCAAATTCATGTGCCTTCATTAATCTGTGGCCTCAAGATGTTATGAAAAGCAGAGGAAGAAGAAGAGGAACCAAACCCTCCCTCAAAGAAAAAGCACGATTCCTGTTCCACCTCTGCTTTCTCTCTGCTCCTCCATTATTACTATCTCTCACCTTCCATTCCTCTTTTCACCATTTTATTTTACCTCCTTTCCTTTTAGCTCAATTTACGGACCTACCTTCCGGTATCTATTGCGAACTTGAAAGGCTAATTGAAGTATCAATGTTTATGGCTGGTTTTGTTTACTCGATTGTTGAGAAATATATCAAAGAAGCTCGCGTCCTCATCGCCACCCAAGAACAGAGCGAGATCGCATCGGCTCTGAACCTTGTAGACGCGGCACTGGCCATATCCCCACGCCTAGACCAGGCGCTCGAGCTAAGAGCCAGGTCTCTTCTTTATCTCCGGCGTTTTAAGGACGTCGCCGATATGCTTCAGGACTACATTCCCAGCCTCAAGATGGCGGTCGAGGACTCGGGCTCTTGTTCTTCGGATAATTCGTCTCAGCAGCTCTCGAGGGAGGGAGTGAAGCTGCTCTCGTCTTCGGAATCGTCGTCGCCGGATCAGAGTTTCAAGTGCTTCTCCGTCTCGGACTTCAAGAAGAAAGTGATGGCAGGGCTGTGTAAAAGTGGCGAGAAGGGAGGGCAATGGAGATACTTGGTGCTGGGTCAAGCATGTTGCCATCTCGGTCTGATGGAGGATGCGCTGGTTCTTCTCCAAACCGGGAAACGACTTGCCAGCGCCGCCTTCCGCCGCGAGAGCGTTTGCTGGGCCGACGACAGCTTCTCTTTAAACATTCGCTTCTCCGGTGACGCGACCCACCCCCCTCCTACCACTCCACCTCGAACACCTCTTACAGAATTTGAGAGCGTCACCCAACTCCTCAGCCACATCAAGCTCCTCCTCCGCCGCCGCACTGCGGCCCTCGCAGCCCTTGACGCCGGCCTCTATTCTGAGGCCATCCGCCACTTCTCCAAAATCGTCGACGGCCGCCGTGGCGCTCCGCAAGCCTTTCTCGCCGAATGCTATATGAAGAGAGCCTCTGCCTACCGTTCTGCAGGCCGAATCGCAGAGTCCATTGCGGATTGTAATCGCACACTGGCTTTGGACCCCAGTTGCATTCAAGCTCTTGATACCAGAGCTGCCCTTCTAGAGTCAATTCGATGCTTGCCTGATTGCCTACACGATCTTGAACACTTGAAGCTTTTGTACAATACAATCTTGCGGGACCGTAAGCTTCCAGGTCCTGCTTGGAAGCGTCATAATGTAAGGTACAAAGAGATTCCTGGGAAACTCTGCGCTCTCACGACGAAAATTCAAGAACTGAAGCAAAGGGTGGCTTCAAGGGAAACTGGTAATGTGGATTACTACGCTTTGATTGGATTGCGACGTGGCTGCTCTCGATCGGAGTTGGAGAGGGCTCATTTGTTGCTCTGTTTACTGCACAAACCGGATAAAGCTACCAGCTTCATTGATCGCTGCGAGCTTGCGGACGAACGAGATCTTGAATCGGTGAAGGAGAGGTCAAAAATGTCAGCATTGTTATTGTACAGATTGATTCAGAAGGGTTACACGAGTGTGATGGCTACGATCATGGATGAAGAAGCCGCTGAGAAGCAGAGGAAGAAGGCGGCTGCCGCCTTGCAAGCCGCACAAGCAGCAATTCAGGTTCCGGAAAAAAGTGGGTGCAGAACGGACTATGAGGGGCAGAAATCAGAGAAAACAGTATCTTCATCGACTGTAAACCCTTCTGTATTCCAGGGGGTGTTTTGCCGTGATCTTGCCGTCGTCGGGAGCCTGCTTTCTCAAGCGGGATTCAACCGTTCTATTCCAATGAAATATGAGGCATTGAGCTGCTGA 1968 0.5097 MEKVGATEREVREAFRQTHLAVYPNSCAFINLWPQDVMKSRGRRRGTKPSLKEKARFLFHLCFLSAPPLLLSLTFHSSFHHFILPPFLLAQFTDLPSGIYCELERLIEVSMFMAGFVYSIVEKYIKEARVLIATQEQSEIASALNLVDAALAISPRLDQALELRARSLLYLRRFKDVADMLQDYIPSLKMAVEDSGSCSSDNSSQQLSREGVKLLSSSESSSPDQSFKCFSVSDFKKKVMAGLCKSGEKGGQWRYLVLGQACCHLGLMEDALVLLQTGKRLASAAFRRESVCWADDSFSLNIRFSGDATHPPPTTPPRTPLTEFESVTQLLSHIKLLLRRRTAALAALDAGLYSEAIRHFSKIVDGRRGAPQAFLAECYMKRASAYRSAGRIAESIADCNRTLALDPSCIQALDTRAALLESIRCLPDCLHDLEHLKLLYNTILRDRKLPGPAWKRHNVRYKEIPGKLCALTTKIQELKQRVASRETGNVDYYALIGLRRGCSRSELERAHLLLCLLHKPDKATSFIDRCELADERDLESVKERSKMSALLLYRLIQKGYTSVMATIMDEEAAEKQRKKAAAALQAAQAAIQVPEKSGCRTDYEGQKSEKTVSSSTVNPSVFQGVFCRDLAVVGSLLSQAGFNRSIPMKYEALSC 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2110 655 PANTHER OS01G0273500 PROTEIN 117 655 - -
Lele13g2110 655 Gene3D Tetratricopeptide repeat domain 323 449 IPR011990 GO:0005515
Lele13g2110 655 SMART tpr_5 376 409 IPR019734 GO:0005515
Lele13g2110 655 SUPERFAMILY Chaperone J-domain 485 525 IPR036869 -
Lele13g2110 655 SUPERFAMILY TPR-like 343 437 IPR011990 GO:0005515
Lele13g2110 655 CDD DnaJ 491 525 IPR001623 -
Lele13g2110 655 Gene3D DnaJ domain 476 623 IPR036869 -
Lele13g2110 655 SMART dnaj_3 490 572 IPR001623 -
Lele13g2110 655 Coils Coil 570 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2110 Lele-ChrLele13 27958966 27963017 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0172 06 1051817 1054534 Lele13g2110 13 27958966 27963017 CCT
Lele07g0372 07 2110581 2115131 Lele13g2110 13 27958966 27963017 CCT
Lele08g0177 08 1094628 1097350 Lele13g2110 13 27958966 27963017 CCT
Lele05g0353 05 2026728 2029975 Lele13g2110 13 27958966 27963017 CCT
Lele13g2110 13 27958966 27963017 Lele15g0299 15 1700081 1702415 hybridization
Lele13g2110 13 27958966 27963017 Lele16g0311 16 1740129 1742470 hybridization