Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2108 ATGGATGCCCTGTGTTTTAAACGTGGTATAACTGGGATACCTCCAGCGATCTCCATTAACGGGCCCTTGGATGCGTGGACAAACCTATCTCAGGTAAGCGCGGTTGGGCGGTCGTCGACGGAGAAATCGACGCACAAATCCGTCTTTTCAAGATTCTCGTTTAAGTACCATTTGAAATCTCTCTGGCCCGGCGGAAGTGGAAGTAGCAGGTACAATGGGTTGGCCATCGACGAGGCCGTATCGGTTGAAGAGAGGGATGAAAAAGCCGTTCAAGAAGACAAGGATAATGGAATAACGAGTCCAGAGGGCCAGAATGAGAGCTGGGTCTTGAAGATTTTGCATGTTAAATCTATCTGGAGGGGTGAACAGGGGAAAAGTGCTCATGGCGGTGGTGATGAAGATACGGAAATCGAAGAGAAGGAGGATGTTGCCAACGATCAAATAAACGGGTCGGAGTGGGATAATGAGGAGCCATGTGATGCTTGCAAGATTGATGATGACGATGATAAAGAGATTCAGTTTGATAGGAATTCATTTTTGAGGATGCTTCGGAGGGTGTCGCTAGCTGAAGCCAGACTGTACGCTCAGATGTCCTACCTGGGAAGCTTGGCATACTGTATCCCCCAAATGAAGACAGAGAATCTATTGAAAAATTATGGACTGCGTTTTGTAACGTCATCACTAGACAAAAGAGGCTCCTCTACAACGGCTGAAAAAAATCAGGTGTCAACTGAAACTCAGGAAGTAGAAACTAATGTACATGACAGAGAAGAAAACAAGGAACGGAAGAACAGTAGACCCAAGATTAGTGCATTGGCTGCTTATGAGATTGCTGCCTCTGCAGCCTCTTACCTCCATGCTCAGACCAGGAGCATAATTCCATTTAGATCCTCAAAAGATGGGGTTGGTGAAGGTTCACTTGAAGGAGGCAGTGAAAGTGTTGATGGTGTCAACATGGTAAACACAGAGGTAGCTTCTTTGATCGCGACTACTGATTCAGTGACAGCAGTAGTGGCTGCAGAGGAGGACGTGAAGCAGGCAGTTGCAGATGATTTGAACTCAACAAGTTCATCACCCTGTGAATGGTACATATGTGATGATGACCAGAGTGGGACTAGATTTTTCGTCATCCAGGGTTCTGAGTCCCTAGAATCCTGGCAAGCAAACCTACTCTTTGAGCCTGTTCAATTTGAGGGGCTGGATATTCTTGTCCATAGAGGTATATATGAGGCTGCTAAAGGGATCTACCAAAAGATGTTGCCAGAAGTTCATGCACACCTAAAATCTCAAGGTTCTTGTGCAACCTTCCGTTTCACAGGGCATTCTCTCGGGGGAAGTCTGGCATTGCTCGTAAATCTCATGCTGCTGATGAGAGAAGAAGTGCCAGTCTCCTCCCTGCTTCCTGTTATAACCTTCGGTGCCCCTTCCATCATGTGTGGAGGTGACAGACTGCTGGACAAGCTAGGATTGCCCCGGAGTCATGTTCAGGCAGTTACAATGCACAGAGACATTGTACCACGAGCCTTTTCTTGCAATTATCCTAATCATGTAGCAGAGCTGCTAAAGGCTATTAATGGAAACTTCCGTAATCATCCTTGTCTTAATAGCCAGAAGGTCTTATATACACCTATGGGTGAACTGCTAATTCTGCAGCCAGATGAGAAATTTTCCCCGGGACATGACCTCCTTCCGGCAGGCTGTGGTCTATATCTTTTGAGTGGTCCTTCGTCAGGATCCAATCAGAACTTCTACGGGCAGCTCCTAACTGCACAGCTGGTGTTCTTGAACTCACCACACCCACTTGAGATCTTAAGTGACCGATCTGCTTATGGCTCAGGTGGAACTGTACAAAGGGATCATGACATGAATTCCTACTTAAAATCTGTAAGAAGCGTGATTCGCGACGAACTTAAAAGAACCCGAAGGAGGAGGAGAGAGCACAGGCGGAAGGCGTGGTTGCCTCTGGTGGCACTGGCACCCTATGGGATTGATGCAGGCTCCGTTGTTAGGAGTTCGGTGGTATCAATGAATGTAAGTGAAGAGGGGTCAGCCTTCGCAGGATTCATAAAAACAGGGAGAGAGTCATTGAAAAGGTTCAGTAGGCTAGTTGCATCCCAGCACATGCATTTGTTTGTGGTGTTCCCGTTTCCAGCACTCTTGTTACTCCCGAGCACCATCAATTTCCATTGA 2190 0.4699 MDALCFKRGITGIPPAISINGPLDAWTNLSQVSAVGRSSTEKSTHKSVFSRFSFKYHLKSLWPGGSGSSRYNGLAIDEAVSVEERDEKAVQEDKDNGITSPEGQNESWVLKILHVKSIWRGEQGKSAHGGGDEDTEIEEKEDVANDQINGSEWDNEEPCDACKIDDDDDKEIQFDRNSFLRMLRRVSLAEARLYAQMSYLGSLAYCIPQMKTENLLKNYGLRFVTSSLDKRGSSTTAEKNQVSTETQEVETNVHDREENKERKNSRPKISALAAYEIAASAASYLHAQTRSIIPFRSSKDGVGEGSLEGGSESVDGVNMVNTEVASLIATTDSVTAVVAAEEDVKQAVADDLNSTSSSPCEWYICDDDQSGTRFFVIQGSESLESWQANLLFEPVQFEGLDILVHRGIYEAAKGIYQKMLPEVHAHLKSQGSCATFRFTGHSLGGSLALLVNLMLLMREEVPVSSLLPVITFGAPSIMCGGDRLLDKLGLPRSHVQAVTMHRDIVPRAFSCNYPNHVAELLKAINGNFRNHPCLNSQKVLYTPMGELLILQPDEKFSPGHDLLPAGCGLYLLSGPSSGSNQNFYGQLLTAQLVFLNSPHPLEILSDRSAYGSGGTVQRDHDMNSYLKSVRSVIRDELKRTRRRRREHRRKAWLPLVALAPYGIDAGSVVRSSVVSMNVSEEGSAFAGFIKTGRESLKRFSRLVASQHMHLFVVFPFPALLLLPSTINFH 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2108 729 MobiDBLite consensus disorder prediction 230 248 - -
Lele13g2108 729 SUPERFAMILY alpha/beta-Hydrolases 357 550 IPR029058 -
Lele13g2108 729 MobiDBLite consensus disorder prediction 145 164 - -
Lele13g2108 729 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 32 720 IPR043367 GO:0008970
Lele13g2108 729 MobiDBLite consensus disorder prediction 230 266 - -
Lele13g2108 729 Gene3D alpha/beta hydrolase 319 543 IPR029058 -
Lele13g2108 729 Coils Coil 630 650 - -
Lele13g2108 729 MobiDBLite consensus disorder prediction 249 266 - -
Lele13g2108 729 CDD Lipase_3 358 514 - -
Lele13g2108 729 Pfam Lipase (class 3) 375 512 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2108 Lele-ChrLele13 27946260 27949446 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2108 1 727 Acyl Lipid Metabolism Gene Families AT1G02660 55.299 0.0 707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0355 05 2040062 2042472 Lele13g2108 13 27946260 27949446 CCT
Lele13g2108 13 27946260 27949446 Lele15g0302 15 1714652 1717844 hybridization
Lele13g2108 13 27946260 27949446 Lele16g0314 16 1761415 1764681 hybridization