Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2083 ATGGCCTTCGTGATTCTCCTCTTACTCTTACCTTCACTGGCTTTTGCAGAATCTCTCTCTCCTGCAACTCTATGCCAGCATACCCCCGAACCTTCTTACTGCATGTCCCTGCTTCCTCCCCAAAACGCCACCTTCCATGACTCTTGTCGCTTCTCTCTCCTCCACTCCTTAGTGCGGGCCCGCAAATTCTTGAACTCCGTCGACCAACTTCTTCGACGGCGCTCTTCTTTGTCCGCTGTGGCGGTCGCTGACCTTGAAGATTGCCGGATGCTCGCCGACCTGAACATAGATTTTCTCTCAAGTTCGTTGCAAATCATTAATAAGACGGCTGGGTTTCTCTCGGATATCGAAATTGACAGTGTTAAAACCATGCTCAGTGCCGTTTTAACCAACCATGAAACCTGCTTGGACGGCCTTCAAGACACTGCCGCTTCTTCTCATCCGAGATTAGTAAGAGGGCTGTCCTTCTCACTTTTTGATGACGATGAGAAGCTTTTTGGAGTCTCTTTGTCCCTTTTCACGAAGGGTTGGGTCCACGCGAGTAAACAAAGACCCGAATTATCGTGGCACCAACCTCCGCAAATGCAAGCTGTATTCCGAAATGGTAATTTGCTTCTTGCGATGTCGAACAGAACGCGTGCTATCTTCGAGGCTGCTAGTAATAGAAAACTAGACCTGGCTTTTGAAGCTCCCTTCGTGGCATTTGTGAAAGACATCGTGACGGTGAGTAAAGACGGAAGAGGTAACTTCACCACCATCAACAGTGCCCTTTCTGCAGCTCCCAACACAACTTCCTCTTCGAAAGGCTACTTCTTGATCTATGTCTCAGCTGGAGTTTACGAAGAATATGTTTACATCCATAAGGAGAAAGCCTACCTGATGATGATCGGAGATGGCATCAACAGGACTATCATCACGGGCAATCGCAGCCATGACGATGTGTGCAAAACCTTCAGATCTGCAACATTCGCTGTGCACGGGAAGGGATTTATGGGGGTGAATATAACATTTCGCAACACAGCAGGGTCGGAAAAGCACCAAGCGGTGGCAGTGAGAAACTCAGCAAACTTGTCATTGTTTTATAGCTGCAGCTTTGAGGGGTACCAAGACACTCTCTATGCGCATTCCATGAAACAGTTCTACAGAGAATGTGATATATACGGCACGGTAGATTTCATATGCGGGAATGCGGCGGCCGTCTTCCAGAACTGCAACATCTATGCTCGGAAGCCCATGGGGAAGCAATTCAATGCCATCACAGCACAAAGTCGAGTGAGTGATGATCAGAATACCGGCTTCTCCATACATAACTGCACAATTCGAGCAGCCGAGGACCTGGTGGGGACAATGACGTACCTGGGAAGACCATGGAAGCCGCTGTCGCGGACGGTTTACATGGAGAGCTTCATGGATAGCATCATAGATGGGGCTGGTTGGCACGTGTGGCAAAATGACAATGAGAGTCGCCGGAACAGCTTGTATTACGCAGAATATAAGAATTCGGGCCCAGGCTCCGATGGCTCAAACCGGGTCACCTGGAAGGGTTATCATGTCATTAACTCTTCCATTGCTGCTGATTTCACTGTCTCCAACTTCTTGTATGGCGATTATTGGTTGCCCCGCACTGGTGTCCCCTACTCTAGTCACTTGATTAACTCTTCATTTCCTCCATAA 1674 0.4863 MAFVILLLLLPSLAFAESLSPATLCQHTPEPSYCMSLLPPQNATFHDSCRFSLLHSLVRARKFLNSVDQLLRRRSSLSAVAVADLEDCRMLADLNIDFLSSSLQIINKTAGFLSDIEIDSVKTMLSAVLTNHETCLDGLQDTAASSHPRLVRGLSFSLFDDDEKLFGVSLSLFTKGWVHASKQRPELSWHQPPQMQAVFRNGNLLLAMSNRTRAIFEAASNRKLDLAFEAPFVAFVKDIVTVSKDGRGNFTTINSALSAAPNTTSSSKGYFLIYVSAGVYEEYVYIHKEKAYLMMIGDGINRTIITGNRSHDDVCKTFRSATFAVHGKGFMGVNITFRNTAGSEKHQAVAVRNSANLSLFYSCSFEGYQDTLYAHSMKQFYRECDIYGTVDFICGNAAAVFQNCNIYARKPMGKQFNAITAQSRVSDDQNTGFSIHNCTIRAAEDLVGTMTYLGRPWKPLSRTVYMESFMDSIIDGAGWHVWQNDNESRRNSLYYAEYKNSGPGSDGSNRVTWKGYHVINSSIAADFTVSNFLYGDYWLPRTGVPYSSHLINSSFPP 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2083 557 Pfam Pectinesterase 240 536 IPR000070 GO:0030599|GO:0042545
Lele13g2083 557 Gene3D - 234 550 IPR012334 -
Lele13g2083 557 Gene3D Invertase/pectin methylesterase inhibitor family protein 22 175 IPR035513 -
Lele13g2083 557 PANTHER PECTINESTERASE 13 540 - -
Lele13g2083 557 CDD PMEI-like_3 23 177 - -
Lele13g2083 557 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 23 148 IPR035513 -
Lele13g2083 557 TIGRFAM PME_inhib: pectinesterase inhibitor domain 3 143 IPR006501 GO:0004857
Lele13g2083 557 Pfam Plant invertase/pectin methylesterase inhibitor 22 147 IPR006501 GO:0004857
Lele13g2083 557 SMART PMEI_2 16 172 IPR006501 GO:0004857
Lele13g2083 557 FunFam Pectinesterase 234 550 - -
Lele13g2083 557 SUPERFAMILY Pectin lyase-like 236 548 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2083 Lele-ChrLele13 27806434 27808203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2083 3 552 Carbohydrate Esterase AT1G02810 51.993 0.0 582