Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2074 ATGAACCGCGGGGCAGCAACTGGGGCCAAGGGCAAGAAGAAGGGAGTCAGCTTCGTCATCGACTGTTCGAAGCCGGTCGAAGATAAGATCATGGAAGTCGCCTCGCTTGAGAAGTTCCTTCAGGAGAGGATTAAGGTCGGTGGCAAGGCCGGTGCACTCGGTGACTCCGTCACTGTCACTCGTGACAAGAACAAGATCGCCGTTACTTCCGACAGCAATTTCTCTAAACGGTACTCTTATTTTGTTTCTTTTCGTTTCTCCTGCTGCTTTTGCTCTTCGACTATTGCTAATGATGATTTTTCCATTTGTTATGGATTTCTACAACCCTTTATTATTCCTTATTCATTCTAGTATTTGAAATATTTGACAAAGAAGTACCTGAAGAAGCATAACGTGAGGGATTGGCTTCGTGTGATTGCGTCCAACAAGGAGCGCAATGTCTACGAGTTAAGATACTTCAACATCGCCGAGAACGAGGGAGAGGAGGAAGACTAG 495 0.4606 MNRGAATGAKGKKKGVSFVIDCSKPVEDKIMEVASLEKFLQERIKVGGKAGALGDSVTVTRDKNKIAVTSDSNFSKRYSYFVSFRFSCCFCSSTIANDDFSICYGFLQPFIIPYSFXYLKYLTKKYLKKHNVRDWLRVIASNKERNVYELRYFNIAENEGEEED 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2074 164 FunFam 60S ribosomal protein L22-2 5 87 - -
Lele13g2074 164 PANTHER 60S RIBOSOMAL PROTEIN L22 113 164 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lele13g2074 164 Pfam Ribosomal L22e protein family 14 80 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lele13g2074 164 Pfam Ribosomal L22e protein family 113 162 IPR002671 GO:0003735|GO:0005840|GO:0006412
Lele13g2074 164 Gene3D - 5 164 IPR038526 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2074 Lele-ChrLele13 27774299 27776190 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2074 1 164 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 64.024 9.15e-59 177
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2074 13 27774299 27776190 Lele15g0333 15 1891036 1892287 hybridization
Lele13g2074 13 27774299 27776190 Lele16g0345 16 1916797 1918248 hybridization