Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2071 ATGAGCATCACAGATACAGGAAATTTGGTGTCTGCGAGAGGGAACACTTATGTCAGGCACGCATGCTCAGTGACTATGTACCCAGACCTGTGTATCCACTCACTCGCATCATTTTCCAACGCGGCCAGAAACAGCCCGAGCAAGTGGGCCCGAGCAGGAGTGTCGGTGACAATATCCGAGGTTAAGAATGTTCAAGCACATCTTGCCAAGTTGAAGAGATACCGTCGTCTCAGAGGAAGAAACAGGGCCGCTCTTTCAGATTGTATCGATACCTTCACAGATGCGCTCGATGAGCTTCACAGATCCCTTGGAGTGCTCAGAAGGCTAAGCAGAAACACGTTCAGTGACCAGATGGATGATCTCAATACATGGATAAGTGCAGCTCTCACTGATGAAGATACTTGCCTCGATGGGTTTGAAGGCCAAAAGGAGAGGCAGATTAAATTTCTGCAGAGTCAGGTTCAGAAAGTTTCTTATATAACCAGCAACGCTCTTGCTCTTGTCAACAAACTTGCCACTACGGGTCTGGATAGCGTCACTGGTCCATAG 549 0.4827 MSITDTGNLVSARGNTYVRHACSVTMYPDLCIHSLASFSNAARNSPSKWARAGVSVTISEVKNVQAHLAKLKRYRRLRGRNRAALSDCIDTFTDALDELHRSLGVLRRLSRNTFSDQMDDLNTWISAALTDEDTCLDGFEGQKERQIKFLQSQVQKVSYITSNALALVNKLATTGLDSVTGP 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2071 182 Gene3D Invertase/pectin methylesterase inhibitor family protein 13 173 IPR035513 -
Lele13g2071 182 TIGRFAM PME_inhib: pectinesterase inhibitor domain 11 171 IPR006501 GO:0004857
Lele13g2071 182 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 16 171 IPR035513 -
Lele13g2071 182 Pfam Plant invertase/pectin methylesterase inhibitor 17 167 IPR006501 GO:0004857
Lele13g2071 182 FunFam Pectinesterase inhibitor 3 13 172 - -
Lele13g2071 182 CDD PMEI-like_3 21 173 - -
Lele13g2071 182 PANTHER PECTINESTERASE INHIBITOR-LIKE 14 167 - -
Lele13g2071 182 SMART PMEI_2 13 167 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2071 Lele-ChrLele13 27767176 27768112 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2071 10 174 Carbohydrate Esterase AT3G14310 32.941 5.58e-23 93.2