Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2055 ATGAGGGGGAAGAGATATGGGAGGAGGACCGGCAGCGGAAGACGAAGTGAGAGTAAGGAGGCGACCAAAATGAAGGGACCACTAGCTAGGCACTTGCAGAATCAGCTAGGGCAAGTGTCCCTCTTTCCCCTTCACCAACAGTCATCGTCTACCGCCGTCCCTCGCTTCCAGAACCTTCTTGAAGCCGAAGCCCGTGACAGCAATCTTCCATCATCCTCTCCTCATGCTCTGGATCACATGGTTGACGCCAATGTGGACGAAAAAGATTTAATTCTCAGCCAAGATTTCTTTTGCACTCCAGATTATATAACCCCGGATAATCAGTATATTTTTAACGGCTTGGACTGCAACAAGGAGAATATCCCATGTCCCAAATCACCGGAAAAACTAAATACTACAAAAAGCAAGAGATGCCGATTGGACGGTATCTCAGGGAACCCTCTCAGCCCTACTTTGTCTGGTGGCCATCAAGCTGTGGAGCTTGGAACTGAGTCTGGCGCAGATGAAGCAGATATTGAGAAACTGATTCCCACTGGCAAGCCAAAAGCTCAAAATTATATCTCACATTCTGTGGTTACCTTGCGCTCCAGGGCCATACCCCCTCCTTGCATTAGGAACCCGTATTTGAAAGATCATTTGGATAAGGACAAAGATCCCTATGGGAACCAAAGATCAAAATATGCAGGTGTGTTCCCTGCAATTACTGGCGGTGATGGGCTTTCACGCTATCACACTGACTTCGTTGAGATTGAGCAAATTGGTATAGGAAACTTTAGTAACGTTTTCAAAGTTTTAAAGAGAATAGACGGTTGTTTGTATGCCGTGAAACACAGCACAAGAAAGTTGTGCCAGGAAACAGAAAGGAGAAAAGCTTTGATGGAAGTTCAAGCACTGGCAGCCTTAGGATCCCATGAAAACATAGTGGGATACTATTCTTCATGGTTCGAAAATGAGCGGCTGTATATTCAGATGGAGTTATGTGATCATAGCTTATCCATAAGCAAGGCCAATACAATGTTTACAGAAGGACAAGTGTTAGAAGCACTGCATCAGGTTGCAAAGGCACTGTTGTTTATACATGAAAGAGGAATAGCTCATCTTGATGTTAAACCTGATAATATTTATGTCAAAAATGGAGTCTATAAGCTTGGTGATTTTGGCTGTGCAACTCTCCTTGATAAGAGCCTGCCAATTGAAGAGGGTGATGCACGTTATATGCCCCAGGAAATCCTGAATGAGAATTATGATCACCTTGACAAGGTTGATATTTTTTCTTTGGGAACTTCTATTTTTGAGCTCATTCGAGGATCACCTTTGCCAGAATCAGGATGTAATTTTTTCAATCTGAAAGAAGGCAGGTTGCCACTCCTGCCTGACCATTCGTTGCAATTTCAGAACTTGCTCAAGGTCATGATGGACCCTGATCCTGTTAAACGACCTAGTGCAAGAGAGTTAGTGGAGAACCCGGTCTATGATTGGGCCCTAGGAAATGCAAAATATTGA 1503 0.4405 MRGKRYGRRTGSGRRSESKEATKMKGPLARHLQNQLGQVSLFPLHQQSSSTAVPRFQNLLEAEARDSNLPSSSPHALDHMVDANVDEKDLILSQDFFCTPDYITPDNQYIFNGLDCNKENIPCPKSPEKLNTTKSKRCRLDGISGNPLSPTLSGGHQAVELGTESGADEADIEKLIPTGKPKAQNYISHSVVTLRSRAIPPPCIRNPYLKDHLDKDKDPYGNQRSKYAGVFPAITGGDGLSRYHTDFVEIEQIGIGNFSNVFKVLKRIDGCLYAVKHSTRKLCQETERRKALMEVQALAALGSHENIVGYYSSWFENERLYIQMELCDHSLSISKANTMFTEGQVLEALHQVAKALLFIHERGIAHLDVKPDNIYVKNGVYKLGDFGCATLLDKSLPIEEGDARYMPQEILNENYDHLDKVDIFSLGTSIFELIRGSPLPESGCNFFNLKEGRLPLLPDHSLQFQNLLKVMMDPDPVKRPSARELVENPVYDWALGNAKY 500
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2055 500 ProSitePatterns Protein kinases ATP-binding region signature. 253 276 IPR017441 GO:0005524
Lele13g2055 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Lele13g2055 500 Gene3D Phosphorylase Kinase; domain 1 238 325 - -
Lele13g2055 500 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE EIF2-ALPHA KINASE -RELATED 109 488 - -
Lele13g2055 500 SUPERFAMILY Protein kinase-like (PK-like) 240 489 IPR011009 -
Lele13g2055 500 ProSiteProfiles Protein kinase domain profile. 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g2055 500 FunFam Wee1-like protein kinase 326 494 - -
Lele13g2055 500 MobiDBLite consensus disorder prediction 10 26 - -
Lele13g2055 500 FunFam WEE protein kinase 237 325 - -
Lele13g2055 500 Pfam Protein kinase domain 248 489 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g2055 500 MobiDBLite consensus disorder prediction 1 27 - -
Lele13g2055 500 SMART serkin_6 247 491 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele13g2055 500 Gene3D Transferase(Phosphotransferase) domain 1 326 493 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2055 Lele-ChrLele13 27673857 27676927 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2055 8 496 Core Cell Cycle Gene Families AT1G02970 59.312 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WEE Lele13g2055 Pkinase 2.7e-47 CL0016